RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF556Q9HAH1 456 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 ZNF222Q9UK12 451 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 CLUHO75153 1309 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 TFAP2AP05549 437 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 ZNF181Q2M3W8 571 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 LPGAT1Q92604 370 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 NARS2Q96I59 477 aaKnown RBP13.08□□□□□ -0.32
VAMP4-201ENST00000236192 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 KRT84Q9NSB2 600 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 CNOT11Q9UKZ1 510 aaKnown RBP13.08□□□□□ -0.32
VAMP4-201ENST00000236192 AP4E1Q9UPM8 1137 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 USP17L5A8MUK1 530 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 PLD2O14939 933 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 ITGAVP06756 1048 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 QARSP47897 775 aaKnown RBP13.08□□□□□ -0.32
VAMP4-201ENST00000236192 IDH3AP50213 366 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 GRTP1Q5TC63 336 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 PLET1Q6UQ28 207 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 KIAA0408Q6ZU52 694 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 WDR36Q8NI36 951 aaKnown RBP13.08□□□□□ -0.32
VAMP4-201ENST00000236192 SLCO2A1Q92959 643 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 NPAS2Q99743 824 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 UCKL1Q9NWZ5 548 aa13.08□□□□□ -0.32
VAMP4-201ENST00000236192 ZMAT5Q9UDW3 170 aaKnown RBP13.08□□□□□ -0.32
VAMP4-201ENST00000236192 KCNH1O95259 989 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 DLDP09622 509 aaKnown RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 ATF6P18850 670 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 TP53BP2Q13625 1128 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 SNAP47Q5SQN1 464 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 GRAMD2AQ8IUY3 354 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 ELMOD1Q8N336 334 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 CNTD1Q8N815 330 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 TBC1D13Q9NVG8 400 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 TPP1O14773 563 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 IL18R1Q13478 541 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 VWA5B1Q5TIE3 1220 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 IL23RQ5VWK5 629 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 TICAM1Q8IUC6 712 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 NODALQ96S42 347 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 HDHD2Q9H0R4 259 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 DCP1AQ9NPI6 582 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 IMPAD1Q9NX62 359 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 PAQR5Q9NXK6 330 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 KCND2Q9NZV8 630 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 MAPRE3Q9UPY8 281 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 NOX1Q9Y5S8 564 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 SNX9Q9Y5X1 595 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 KCNE2Q9Y6J6 123 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 A0A0B4J269 797 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 A0A0G2JPF8 293 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 TCRBV9S1A1TA0A576 114 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 HNRNPCL3B7ZW38 293 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 HNRNPCL4P0DMR1 293 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 SLC7A1P30825 629 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 COX10Q12887 443 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 GTF2H3Q13889 308 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 TMEM119Q4V9L6 283 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 RBM48Q5RL73 367 aaKnown RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 UBE2UQ5VVX9 321 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 CGB2Q6NT52 195 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 ZNF517Q6ZMY9 492 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 IGFN1Q86VF2 1251 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 CACYBPQ9HB71 228 aaKnown RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 DPP3Q9NY33 737 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 PIGNO95427 931 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 PSAPP07602 524 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 SNRPFP62306 86 aaKnown RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 SCN1BQ07699 218 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 RIPPLY1Q0D2K3 151 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 TNFAIP8L3Q5GJ75 292 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 ARHGAP17Q68EM7 881 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 IKBIPQ70UQ0 350 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 SLC43A3Q8NBI5 491 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 IFT80Q9P2H3 777 aaPredicted RBP13.07□□□□□ -0.32
VAMP4-201ENST00000236192 SNX8Q9Y5X2 465 aa13.07□□□□□ -0.32
VAMP4-201ENST00000236192 SLC37A4O43826 429 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 ARHGEF15O94989 841 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 PSKH1P11801 424 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 GLDCP23378 1020 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 DPYSL3Q14195 570 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 BOLA3Q53S33 107 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 RASAL3Q86YV0 1011 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 SPARTQ8N0X7 666 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 CAMKK1Q8N5S9 505 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 ITFG1Q8TB96 612 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 ASB12Q8WXK4 309 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 TMIGD2Q96BF3 282 aa13.06□□□□□ -0.32
VAMP4-201ENST00000236192 ELMO2Q96JJ3 720 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms