RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ANKRD12Q6UB98 2062 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 KLRG2A4D1S0 409 aaPredicted RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ESRRBO95718 433 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 NFICP08651 508 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 IL4RP24394 825 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 IREB2P48200 963 aaKnown RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ACADVLP49748 655 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 CSE1LP55060 971 aaKnown RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SETD3Q86TU7 594 aaPredicted RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 PYROXD2Q8N2H3 581 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 KYQ8NBH2 561 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SLC4A11Q8NBS3 891 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ATP6V1E2Q96A05 226 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 CCDC138Q96M89 665 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SERPINI1Q99574 410 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 MRIQ9BWK5 157 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 MRPL4Q9BYD3 311 aaKnown RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 PCDHAC1Q9H158 963 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SNX13Q9Y5W8 968 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SCN9AQ15858 1988 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 H6PDO95479 791 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 PIK3R1P27986 724 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ADGRE1Q14246 886 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 NEDD8Q15843 81 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 AMHR2Q16671 573 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 FGD3Q5JSP0 725 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ZNF534Q76KX8 674 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 FAM47BQ8NA70 645 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 DCPSQ96C86 337 aaKnown RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 AGAP2Q99490 1192 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 HERC2P3Q9BVR0 1158 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SLC4A5Q9BY07 1137 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 PNPLA8Q9NP80 782 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 ZNF277Q9NRM2 450 aaPredicted RBP14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 IGSF9Q9P2J2 1179 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 SORCS3Q9UPU3 1222 aa14.42□□□□□ -0.1
PCDHB3-201ENST00000231130 OGTO15294 1046 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 ADAM17P78536 824 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 CNTN2Q02246 1040 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 SF3B4Q15427 424 aaKnown RBP eCLIP14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 KCNJ8Q15842 424 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 DEPDC1Q5TB30 811 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 FAM219BQ5XKK7 198 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 TTC33Q6PID6 262 aaPredicted RBP14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 POTEAQ6S8J7 498 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 DNAAF3Q8N9W5 541 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 PDZD8Q8NEN9 1154 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 CEP295NLQ96MC4 621 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 XYLT2Q9H1B5 865 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 POU2F3Q9UKI9 436 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 TSPAN16Q9UKR8 245 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 PRELID1Q9Y255 219 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 MRPL42Q9Y6G3 142 aaKnown RBP14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 RBBP6Q7Z6E9 1792 aaKnown RBP14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 KCNK1O00180 336 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 ATE1O95260 518 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 ATG7O95352 703 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 PIM1P11309 404 aaPredicted RBP14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 ARSAP15289 507 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 JAK1P23458 1154 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 NKX2-5P52952 324 aaPredicted RBP14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 SLC9A4Q6AI14 798 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 GALNT18Q6P9A2 607 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 DCLK2Q8N568 766 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 UBR7Q8N806 425 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 COLGALT1Q8NBJ5 622 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 ZNF669Q96BR6 464 aaPredicted RBP14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 GPRASP2Q96D09 838 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 PCDH12Q9NPG4 1184 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 SNX15Q9NRS6 342 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 MRGBPQ9NV56 204 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 SYBUQ9NX95 663 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 DCDC2Q9UHG0 476 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 STYXL1Q9Y6J8 313 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 BTAF1O14981 1849 aa14.41□□□□□ -0.1
PCDHB3-201ENST00000231130 VWA5AO00534 786 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 PAPSS1O43252 624 aaPredicted RBP14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 TPST1O60507 370 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 BMXP51813 675 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 CCDC14Q49A88 953 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 NLGN1Q8N2Q7 840 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 Q8N9G6 341 aaPredicted RBP14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 TMEM176AQ96HP8 235 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 BIRC8Q96P09 236 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 COQ10BQ9H8M1 238 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 CXorf21Q9HAI6 301 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 TMPRSS4Q9NRS4 437 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 DOCK5Q9H7D0 1870 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 FBXO21O94952 628 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 ZNF182P17025 639 aaPredicted RBP14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 GPD2P43304 727 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 GSSP48637 474 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 CEACAM7Q14002 265 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 SPIDRQ14159 915 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 ANO4Q32M45 955 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 MAP1SQ66K74 1059 aaPredicted RBP14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 NIPAL1Q6NVV3 410 aa14.4□□□□□ -0.1
PCDHB3-201ENST00000231130 STRA8Q7Z7C7 330 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms