RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PHTF2Q8N3S3 785 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 OR6B3Q8NGW1 331 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 FNDC8Q8TC99 324 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 C18orf25Q96B23 403 aaPredicted RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 FBXL8Q96CD0 374 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 SYBUQ9NX95 663 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 SEPT10Q9P0V9 454 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 GJD2Q9UKL4 321 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 APOBEC2Q9Y235 224 aaKnown RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 AP4B1Q9Y6B7 739 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 ALPK3Q96L96 1907 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 GIPC1O14908 333 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 CASQ2O14958 399 aaPredicted RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 MFSD11O43934 449 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 FGFR3P22607 806 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 LMO2P25791 158 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 PHEXP78562 749 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 MSLNQ13421 630 aaPredicted RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 ITGA9Q13797 1035 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 CARTPTQ16568 116 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZNF618Q5T7W0 954 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 KYAT3Q6YP21 454 aaKnown RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 APOBEC3FQ8IUX4 373 aaKnown RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC15A3Q8IY34 581 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 HACE1Q8IYU2 909 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 METTL25Q8N6Q8 603 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 QKIQ96PU8 341 aaKnown RBP eCLIP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 C1orf21Q9H246 121 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 COPS7BQ9H9Q2 264 aaPredicted RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZNF195O14628 629 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 ALDH1A2O94788 518 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 IGHA2P01877 340 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 ZNF286BP0CG31 522 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 CDH15P55291 814 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 MAP3K21Q5TCX8 1036 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 CPNE9Q8IYJ1 553 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 RIN3Q8TB24 985 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 DQX1Q8TE96 717 aaKnown RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 NLRP7Q8WX94 980 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 C11orf84Q9BUA3 381 aaPredicted RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 DDX43Q9NXZ2 648 aaKnown RBP9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 ITGA11Q9UKX5 1188 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 COQ6Q9Y2Z9 468 aa9.59□□□□□ -0.87
HLA-DOA-201ENST00000229829 TSPAN1O60635 241 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 PSMB4P28070 264 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 FDFT1P37268 417 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 ALDH1A3P47895 512 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 CD151P48509 253 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 TNFAIP2Q03169 654 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 CD300CQ08708 224 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 CCNIQ14094 377 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 DLG2Q15700 870 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 ANO4Q32M45 955 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 XKR5Q6UX68 686 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 FRMD7Q6ZUT3 714 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 TFB1MQ8WVM0 346 aaKnown RBP9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 PGBD4Q96DM1 585 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 FCRL3Q96P31 734 aaPredicted RBP9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 AGAP3Q96P47 875 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 SNTG2Q9NY99 539 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 THEGQ9P2T0 379 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 A8MU76 341 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 AIM2O14862 343 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 DCXO43602 365 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 FKBP6O75344 327 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 TYK2P29597 1187 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 CD97P48960 835 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 NOL9Q5SY16 702 aaKnown RBP9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 STEAP4Q687X5 459 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 THOC7Q6I9Y2 204 aaKnown RBP9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 NAPRTQ6XQN6 538 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 TMC7Q7Z402 723 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 OTUD5Q96G74 571 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 P2RY11Q96G91 374 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 DCUN1D1Q96GG9 259 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 PRICKLE1Q96MT3 831 aaPredicted RBP9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 CAB39LQ9H9S4 337 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 ERAP1Q9NZ08 941 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 COPG2Q9UBF2 871 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 KIAA1257Q9ULG3 409 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 USP3Q9Y6I4 520 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 A0A0A0MRY4 1105 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 KCNK1O00180 336 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 RNF103O00237 685 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 ZBTB14O43829 449 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 GLRA3O75311 464 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 OXSR1O95747 527 aaPredicted RBP9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 COPAP53621 1224 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 RELAQ04206 551 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 CDK18Q07002 472 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 FAM187BQ17R55 369 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 PDPK2PQ6A1A2 396 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 SLC2A7Q6PXP3 512 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 MOB2Q70IA6 237 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 CCNYQ8ND76 341 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 ACVR1CQ8NER5 493 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 MAPK15Q8TD08 544 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 CENPIQ92674 756 aaPredicted RBP9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 APBB2Q92870 758 aa9.58□□□□□ -0.88
HLA-DOA-201ENST00000229829 SPATA13Q96N96 652 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms