RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 CERCAMQ5T4B2 595 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 CCNJLQ8IV13 435 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 NPWQ8N729 165 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 ACVR1CQ8NER5 493 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 PYDC1Q8WXC3 89 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 WNT8BQ93098 351 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 PPP1R14BQ96C90 147 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 HNRNPABQ99729 332 aaKnown RBP15.6■□□□□ 0.09
TGFB1-201ENST00000221930 VANGL2Q9ULK5 521 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 STAP1Q9ULZ2 295 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 TIMM13Q9Y5L4 95 aaPredicted RBP15.6■□□□□ 0.09
TGFB1-201ENST00000221930 SNX10Q9Y5X0 201 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 DCLK1O15075 740 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 ZBTB24O43167 697 aaPredicted RBP15.6■□□□□ 0.09
TGFB1-201ENST00000221930 CPA3P15088 417 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 TPH1P17752 444 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 ABCE1P61221 599 aaKnown RBP15.6■□□□□ 0.09
TGFB1-201ENST00000221930 SNX17Q15036 470 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 RNF220Q5VTB9 566 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 NAPRTQ6XQN6 538 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 PHTF2Q8N3S3 785 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 TINF2Q9BSI4 451 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 NAT9Q9BTE0 207 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 C1orf21Q9H246 121 aa15.6■□□□□ 0.09
TGFB1-201ENST00000221930 ZNF195O14628 629 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 TREHO43280 583 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 ADRA1BP35368 520 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 COPAP53621 1224 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 PPP2R5DQ14738 602 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 PAFAH1B3Q15102 231 aaKnown RBP15.59■□□□□ 0.09
TGFB1-201ENST00000221930 LRRC36Q1X8D7 754 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 SV2CQ496J9 727 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 IRGCQ6NXR0 463 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 ZNF781Q8N8C0 355 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 ARL10Q8N8L6 244 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 CPNE1Q99829 537 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 ULBP1Q9BZM6 244 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 BRD8Q9H0E9 1235 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 CHRAC1Q9NRG0 131 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 UTP6Q9NYH9 597 aaKnown RBP15.59■□□□□ 0.09
TGFB1-201ENST00000221930 IGSF9Q9P2J2 1179 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 IPPQ9Y573 584 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 MEIS3P2A8K0S8 358 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 DCXO43602 365 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 GRK2P25098 689 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 PNPLA4P41247 253 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 AP2B1P63010 937 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 UBXN11Q5T124 520 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 PDPK2PQ6A1A2 396 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 IZUMO2Q6UXV1 221 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 GPRIN1Q7Z2K8 1008 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 ZBTB8BQ8NAP8 495 aaPredicted RBP15.59■□□□□ 0.09
TGFB1-201ENST00000221930 HIPK4Q8NE63 616 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 PPP1R36Q96LQ0 422 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 RBBP8Q99708 897 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 ANGPTL2Q9UKU9 493 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 Q9Y3F1 56 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 SLC4A7Q9Y6M7 1214 aa15.59■□□□□ 0.09
TGFB1-201ENST00000221930 E9PBE3 544 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 KLHL41O60662 606 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 NCAM1P13591 858 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 CD1EP15812 388 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 SAT1P21673 171 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 BTG3Q14201 252 aaPredicted RBP15.58■□□□□ 0.09
TGFB1-201ENST00000221930 CCDC92Q53HC0 331 aaPredicted RBP15.58■□□□□ 0.09
TGFB1-201ENST00000221930 GRTP1Q5TC63 336 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 BNIPLQ7Z465 357 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 PSTKQ8IV42 348 aaKnown RBP15.58■□□□□ 0.09
TGFB1-201ENST00000221930 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.58■□□□□ 0.095e-6■■■■□ 19.8
TGFB1-201ENST00000221930 DDX50Q9BQ39 737 aaKnown RBP15.58■□□□□ 0.09
TGFB1-201ENST00000221930 CORO1BQ9BR76 489 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 FAM192AQ9GZU8 254 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 LRRC40Q9H9A6 602 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 COG4Q9H9E3 785 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 TMEM30AQ9NV96 361 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 NDE1Q9NXR1 346 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 PAIP2BQ9ULR5 123 aaKnown RBP15.58■□□□□ 0.09
TGFB1-201ENST00000221930 SORCS3Q9UPU3 1222 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 NRCAMQ92823 1304 aa15.58■□□□□ 0.09
TGFB1-201ENST00000221930 TRIP12Q14669 1992 aaPredicted RBP15.58■□□□□ 0.08
TGFB1-201ENST00000221930 A0A096LPK6 155 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 ZCWPW2A0A1B0GU75 182 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 KLHL2O95198 593 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 USP17L7P0C7H9 530 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 MX2P20592 715 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 CD68P34810 354 aaPredicted RBP15.58■□□□□ 0.08
TGFB1-201ENST00000221930 GARSP41250 739 aaKnown RBP15.58■□□□□ 0.08
TGFB1-201ENST00000221930 AFF1P51825 1210 aaKnown RBP15.58■□□□□ 0.08
TGFB1-201ENST00000221930 CACNA2D1P54289 1103 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 TPI1P60174 286 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 ZBTB17Q13105 803 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 SPANXN3Q5MJ09 141 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 SMG8Q8ND04 991 aaKnown RBP15.58■□□□□ 0.08
TGFB1-201ENST00000221930 PHC3Q8NDX5 983 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 NPLOC4Q8TAT6 608 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 EDEM1Q92611 657 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 SIKE1Q9BRV8 207 aa15.58■□□□□ 0.08
TGFB1-201ENST00000221930 WDR6Q9NNW5 1121 aaKnown RBP15.58■□□□□ 0.08
TGFB1-201ENST00000221930 BFARQ9NZS9 450 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms