RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 CYLC2Q14093 348 aaPredicted RBP18.86■□□□□ 0.61
CACTIN-201ENST00000221899 SLC5A9Q2M3M2 681 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 C9orf57Q5W0N0 161 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 SEL1L3Q68CR1 1132 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 UNC93AQ86WB7 457 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 FAM156AQ8NDB6 213 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 BEST2Q8NFU1 509 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 MPP4Q96JB8 637 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 SNX27Q96L92 541 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 SNX25Q9H3E2 840 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 OXSMQ9NWU1 459 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 RGSL1A5PLK6 1076 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 MATN2O00339 956 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 BEST1O76090 585 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 CRTAMO95727 393 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 MPOP05164 745 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 CEACAM7Q14002 265 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 GRM3Q14832 879 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 PDCD2Q16342 344 aaPredicted RBP18.86■□□□□ 0.61
CACTIN-201ENST00000221899 METTL21CQ5VZV1 264 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 ARMC3Q5W041 872 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 PAOXQ6QHF9 649 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 C16orf89Q6UX73 402 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 RBM44Q6ZP01 1051 aaKnown RBP18.86■□□□□ 0.61
CACTIN-201ENST00000221899 HFE2Q6ZVN8 426 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 TMEM135Q86UB9 458 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 SPATA6LQ8N4H0 392 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 B4GALNT2Q8NHY0 566 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 ISL2Q96A47 359 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 NXF3Q9H4D5 531 aaKnown RBP18.86■□□□□ 0.61
CACTIN-201ENST00000221899 FAM124BQ9H5Z6 455 aaPredicted RBP18.86■□□□□ 0.61
CACTIN-201ENST00000221899 PIGVQ9NUD9 493 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 C6orf203Q9P0P8 240 aaPredicted RBP18.86■□□□□ 0.61
CACTIN-201ENST00000221899 RBPJLQ9UBG7 517 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 ZDHHC2Q9UIJ5 367 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 AP4B1Q9Y6B7 739 aa18.86■□□□□ 0.61
CACTIN-201ENST00000221899 AP2A1O95782 977 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 DPP6P42658 865 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 RPL14P50914 215 aaKnown RBP18.85■□□□□ 0.61
CACTIN-201ENST00000221899 ZNF423Q2M1K9 1284 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 C6orf52Q5T4I8 152 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 IYDQ6PHW0 289 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 RNF169Q8NCN4 708 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 DNAJC1Q96KC8 554 aaKnown RBP18.85■□□□□ 0.61
CACTIN-201ENST00000221899 SERPINI1Q99574 410 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 GRIP2Q9C0E4 1043 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 FAM49AQ9H0Q0 323 aaPredicted RBP18.85■□□□□ 0.61
CACTIN-201ENST00000221899 LZTS1Q9Y250 596 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 CSADQ9Y600 493 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 HDAC3O15379 428 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 ERCC2P18074 760 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 NMBRP28336 390 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 RARS2Q5T160 578 aaKnown RBP18.85■□□□□ 0.61
CACTIN-201ENST00000221899 LILRA2Q8N149 483 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 PIP4K2CQ8TBX8 421 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 EZH1Q92800 747 aaPredicted RBP18.85■□□□□ 0.61
CACTIN-201ENST00000221899 ANLNQ9NQW6 1124 aa18.85■□□□□ 0.61
CACTIN-201ENST00000221899 RCOR3Q9P2K3 495 aaPredicted RBP18.85■□□□□ 0.61
CACTIN-201ENST00000221899 POLR2AP24928 1970 aaKnown RBP18.84■□□□□ 0.61
CACTIN-201ENST00000221899 DNAJC25-GNG10A0A024R161 153 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 CLPTM1O96005 669 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 ACADSBP45954 432 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 DPYSQ14117 519 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 ZNF460Q14592 562 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 FBXO47Q5MNV8 452 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 SPNS2Q8IVW8 549 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 METTL25Q8N6Q8 603 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 KCTD4Q8WVF5 259 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 OPTNQ96CV9 577 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 TMA16Q96EY4 203 aaKnown RBP18.84■□□□□ 0.61
CACTIN-201ENST00000221899 PRICKLE1Q96MT3 831 aaPredicted RBP18.84■□□□□ 0.61
CACTIN-201ENST00000221899 MLPHQ9BV36 600 aaPredicted RBP18.84■□□□□ 0.61
CACTIN-201ENST00000221899 RAP2CQ9Y3L5 183 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 TMEM233B4DJY2 109 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 DCLK1O15075 740 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 GRID2O43424 1007 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 ZBTB7AO95365 584 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 SRGAP2BP0DMP2 458 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 TFEBP19484 476 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 HOXA11P31270 313 aaPredicted RBP18.84■□□□□ 0.61
CACTIN-201ENST00000221899 NUMBP49757 651 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 R3HDM1Q15032 1099 aaKnown RBP18.84■□□□□ 0.61
CACTIN-201ENST00000221899 PIGGQ5H8A4 983 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 ARMCX2Q7L311 632 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 MARVELD2Q8N4S9 558 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 NPWQ8N729 165 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 NPAS2Q99743 824 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 APBA2Q99767 749 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 PKP2Q99959 881 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 SETD4Q9NVD3 440 aa18.84■□□□□ 0.61
CACTIN-201ENST00000221899 PRPF19Q9UMS4 504 aaKnown RBP18.84■□□□□ 0.61
CACTIN-201ENST00000221899 SMIM31A0A1B0GVY4 71 aa18.83■□□□□ 0.61
CACTIN-201ENST00000221899 DENRO43583 198 aaKnown RBP18.83■□□□□ 0.61
CACTIN-201ENST00000221899 SLC25A27O95847 323 aa18.83■□□□□ 0.61
CACTIN-201ENST00000221899 TFAP2AP05549 437 aa18.83■□□□□ 0.61
CACTIN-201ENST00000221899 SBK3P0C264 359 aa18.83■□□□□ 0.61
CACTIN-201ENST00000221899 CD68P34810 354 aaPredicted RBP18.83■□□□□ 0.61
CACTIN-201ENST00000221899 ZBTB17Q13105 803 aa18.83■□□□□ 0.61
CACTIN-201ENST00000221899 PAFAH1B3Q15102 231 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms