RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 NMUR2Q9GZQ4 415 aa10.61□□□□□ -0.71
VCL-201ENST00000211998 NMRAL1Q9HBL8 299 aa10.61□□□□□ -0.71
VCL-201ENST00000211998 C3orf18Q9UK00 162 aa10.61□□□□□ -0.71
VCL-201ENST00000211998 GSTK1Q9Y2Q3 226 aa10.61□□□□□ -0.71
VCL-201ENST00000211998 REXO2Q9Y3B8 237 aaKnown RBP10.61□□□□□ -0.71
VCL-201ENST00000211998 PCDHB7Q9Y5E2 793 aa10.61□□□□□ -0.71
VCL-201ENST00000211998 SAGE2PA6NJ88 616 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 ANXA6P08133 673 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 TCF7P36402 384 aaPredicted RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 CCNIQ14094 377 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 CYP4Z1Q86W10 505 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 TMEM139Q8IV31 216 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 FAM136AQ96C01 138 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 PWWP2AQ96N64 755 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 TMEM39BQ9GZU3 492 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 SPATA7Q9P0W8 599 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 SIK3Q9Y2K2 1263 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 FADS3Q9Y5Q0 445 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 RBM47A0AV96 593 aaKnown RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 TRDMT1O14717 391 aaKnown RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 ASLP04424 464 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 OR1G1P47890 313 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 NEK3P51956 506 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 CYP4F2P78329 520 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 CYP4F3Q08477 520 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 SCRN3Q0VDG4 424 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 PLCL1Q15111 1095 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 NR6A1Q15406 480 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 DCAF6Q58WW2 860 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 ZNF544Q6NX49 715 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 SPESP1Q6UW49 350 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
VCL-201ENST00000211998 TRABD2AQ86V40 505 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 ACTRT2Q8TDY3 377 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 MYDGFQ969H8 173 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 COLEC11Q9BWP8 271 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 TRMT6Q9UJA5 497 aaKnown RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 INO80Q9ULG1 1556 aaPredicted RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 ABCA9Q8IUA7 1624 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 E9PCH4 1651 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 A0A1W2PPM1 405 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 C2orf71A6NGG8 1288 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 H7C4K7 107 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 TPP1O14773 563 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 EPN2O95208 641 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 IFI30P13284 250 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 CHI3L1P36222 383 aaPredicted RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 NAMPTP43490 491 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 INO80DQ53TQ3 878 aaPredicted RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 CCDC157Q569K6 752 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 TDRD10Q5VZ19 366 aaKnown RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 SYTL5Q8TDW5 730 aaPredicted RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 CIB1Q99828 191 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 CLCA2Q9UQC9 943 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 DHRS12A0PJE2 317 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 FAM220BPB1ANY3 271 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 ZC3H11AO75152 810 aaKnown RBP eCLIP10.6□□□□□ -0.714e-7■□□□□ 9.7
VCL-201ENST00000211998 SNRPB2P08579 225 aaKnown RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 SLC2A4P14672 509 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 IDH2P48735 452 aaKnown RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 ACLYP53396 1101 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 IQSEC1Q6DN90 963 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 PGBD2Q6P3X8 592 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 PLET1Q6UQ28 207 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 ARHGAP36Q6ZRI8 547 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 PIGWQ7Z7B1 504 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 MCOLN2Q8IZK6 566 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 INPP4AQ96PE3 977 aaPredicted RBP10.6□□□□□ -0.71
VCL-201ENST00000211998 TAAR1Q96RJ0 339 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 CPNE1Q99829 537 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 USP18Q9UMW8 372 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 SLC9A8Q9Y2E8 581 aa10.6□□□□□ -0.71
VCL-201ENST00000211998 E7ENX8 843 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 IFNA14P01570 189 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 BMP6P22004 513 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 NR4A1P22736 598 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 ARL4DP49703 201 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 GRIK3Q13003 919 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 C15orf59Q2T9L4 293 aaPredicted RBP10.59□□□□□ -0.71
VCL-201ENST00000211998 ZRANB3Q5FWF4 1079 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 GNASQ5JWF2 1037 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 PEX5LQ8IYB4 626 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 CYP4Z2PQ8N1L4 340 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 DPP10Q8N608 796 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 PRELID2Q8N945 189 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 FNDC5Q8NAU1 212 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 GLT1D1Q96MS3 346 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 TBCDQ9BTW9 1192 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 STN1Q9H668 368 aaKnown RBP10.59□□□□□ -0.71
VCL-201ENST00000211998 CDH22Q9UJ99 828 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 OGDHLQ9ULD0 1010 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 OGTO15294 1046 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 TIPRLO75663 272 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 CCNE2O96020 404 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 SERPIND1P05546 499 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 MAPK1P28482 360 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 STAT5AP42229 794 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 HUNKP57058 714 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 TMEM62Q0P6H9 643 aa10.59□□□□□ -0.71
VCL-201ENST00000211998 ITPK1Q13572 414 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms