RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 C20orf96Q9NUD7 363 aaPredicted RBP20.66■□□□□ 0.9
RCN1-201ENST00000054950 SPTLC1O15269 473 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 GRID2O43424 1007 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 MATKP42679 507 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 RANBP1P43487 201 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 NUMBP49757 651 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 NAGLUP54802 743 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 GRM3Q14832 879 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 R3HDM1Q15032 1099 aaKnown RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 KIZQ2M2Z5 673 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 DALRD3Q5D0E6 543 aaKnown RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 PIGGQ5H8A4 983 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 HFE2Q6ZVN8 426 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 APOBEC3FQ8IUX4 373 aaKnown RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 AFG1LQ8WV93 481 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 ISL2Q96A47 359 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 PRPF18Q99633 342 aaKnown RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 NPAS2Q99743 824 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 GOLGA2P5Q9HBQ8 144 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 DDX18Q9NVP1 670 aaKnown RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 OXSMQ9NWU1 459 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 C6orf203Q9P0P8 240 aaPredicted RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 PLXNA1Q9UIW2 1896 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 RGSL1A5PLK6 1076 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 ZBTB24O43167 697 aaPredicted RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 BEST1O76090 585 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 SRGAP2BP0DMP2 458 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 THRAP10827 490 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 AKAP5P24588 427 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 ACAT1P24752 427 aaKnown RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 MPP3Q13368 585 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 CYLC2Q14093 348 aaPredicted RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 PDK1Q15118 436 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 ARHGAP17Q68EM7 881 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 STRADAQ7RTN6 431 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 CTU1Q7Z7A3 348 aaKnown RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 KCNMB4Q86W47 210 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 TTC39CQ8N584 583 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 LINC01465Q8N7H1 131 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 TMA16Q96EY4 203 aaKnown RBP20.65■□□□□ 0.9
RCN1-201ENST00000054950 VPS39Q96JC1 886 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 MAF1Q9H063 256 aa20.65■□□□□ 0.9
RCN1-201ENST00000054950 DNAH12Q6ZR08 3092 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 SMIM31A0A1B0GVY4 71 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 KPNA7A9QM74 516 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 M0QYT0 321 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 SLC26A2P50443 739 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 NOL9Q5SY16 702 aaKnown RBP20.64■□□□□ 0.9
RCN1-201ENST00000054950 SEL1L3Q68CR1 1132 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 SMYD5Q6GMV2 418 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 KLHDC10Q6PID8 442 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 PIGZQ86VD9 579 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 ZSCAN18Q8TBC5 510 aaPredicted RBP20.64■□□□□ 0.9
RCN1-201ENST00000054950 KLK14Q9P0G3 267 aa20.64■□□□□ 0.9
RCN1-201ENST00000054950 GNEQ9Y223 722 aaKnown RBP20.64■□□□□ 0.9
RCN1-201ENST00000054950 TMEM114B3SHH9 223 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 I6L893 689 aaPredicted RBP20.64■□□□□ 0.89
RCN1-201ENST00000054950 EEF2KO00418 725 aaKnown RBP20.64■□□□□ 0.89
RCN1-201ENST00000054950 IRF6O14896 467 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 DENRO43583 198 aaKnown RBP20.64■□□□□ 0.89
RCN1-201ENST00000054950 NMBRP28336 390 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 SLC25A52Q3SY17 297 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 TMEM135Q86UB9 458 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 KCTD4Q8WVF5 259 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 HIC2Q96JB3 615 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 SCYL1Q96KG9 808 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 CAMKK2Q96RR4 588 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 MLPHQ9BV36 600 aaPredicted RBP20.64■□□□□ 0.89
RCN1-201ENST00000054950 PIGVQ9NUD9 493 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 IGSF9Q9P2J2 1179 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 SNX10Q9Y5X0 201 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 CENPFP49454 3210 aa20.64■□□□□ 0.89
RCN1-201ENST00000054950 ZSWIM8A7E2V4 1837 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 HDAC3O15379 428 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 AP1G1O43747 822 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 TRPA1O75762 1119 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 TFEBP19484 476 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 CD68P34810 354 aaPredicted RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 GRM5P41594 1212 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 RPL14P50914 215 aaKnown RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 ZBTB17Q13105 803 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 MYLK3Q32MK0 819 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 RARS2Q5T160 578 aaKnown RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 C16orf89Q6UX73 402 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 PSTKQ8IV42 348 aaKnown RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 TMEM151AQ8N4L1 468 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 NPWQ8N729 165 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 SUDS3Q9H7L9 328 aaPredicted RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 BFARQ9NZS9 450 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 ADAM28Q9UKQ2 775 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 GNL1P36915 607 aaPredicted RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 SNX16P57768 344 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 LRRC23Q53EV4 343 aaPredicted RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 DRAXINQ8NBI3 349 aaPredicted RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 OTUD5Q96G74 571 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 OMDQ99983 421 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 NXF3Q9H4D5 531 aaKnown RBP20.63■□□□□ 0.89
RCN1-201ENST00000054950 WDR41Q9HAD4 459 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 FIS1Q9Y3D6 152 aa20.63■□□□□ 0.89
RCN1-201ENST00000054950 AP2A1O95782 977 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms