RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 GKN1Q9NS71 199 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CDH9Q9ULB4 789 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 TRIP12Q14669 1992 aaPredicted RBP12.29□□□□□ -0.44
CHPF2-201ENST00000035307 GLRA3O75311 464 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 PROCP04070 461 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 NOS2P35228 1153 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 FDFT1P37268 417 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 SCNN1BP51168 640 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
CHPF2-201ENST00000035307 UBXN11Q5T124 520 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CERCAMQ5T4B2 595 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 LATS2Q9NRM7 1088 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 SUN2Q9UH99 717 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 KIAA1217Q5T5P2 1943 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 SUPT3HB4E1H0 165 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 SUPT3HO75486 399 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 KRT36O76013 467 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 CHRM3P20309 590 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 OR1E1P30953 314 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 SLC1A6P48664 564 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 RBBP7Q16576 425 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 MSS51Q4VC12 460 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 FBXO48Q5FWF7 155 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 VSTM1Q6UX27 236 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 KCNMB4Q86W47 210 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 SCUBE1Q8IWY4 988 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 TP53INP2Q8IXH6 220 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 TLCD1Q96CP7 247 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 UPF3AQ9H1J1 476 aaKnown RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 TRPM5Q9NZQ8 1165 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 DPYSL4O14531 572 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 TLR5O60602 858 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 LMNAP02545 664 aaKnown RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 PTPN4P29074 926 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 CTNNB1P35222 781 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 MATKP42679 507 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ZRANB3Q5FWF4 1079 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ZNF572Q7Z3I7 529 aaPredicted RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ELMOD1Q8N336 334 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 CEP70Q8NHQ1 597 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ASIC4Q96FT7 647 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 P2RY11Q96G91 374 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ILKAPQ9H0C8 392 aaPredicted RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 MRPL46Q9H2W6 279 aaKnown RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ATP6AP2A0A1C7CYW4 349 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 MFSD11O43934 449 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 NDUFS3O75489 264 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ATP6AP2O75787 350 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 SEMG2Q02383 582 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 CNGA3Q16281 694 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 PDK4Q16654 411 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 VWA5B1Q5TIE3 1220 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 LRRC38Q5VT99 294 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ULK4Q96C45 1275 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 FCRL2Q96LA5 508 aaPredicted RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 CYP2S1Q96SQ9 504 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 TM6SF2Q9BZW4 377 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 SYBUQ9NX95 663 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 DRG1Q9Y295 367 aaKnown RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 SH3BP1Q9Y3L3 701 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 MOXD2PA6NHM9 499 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 UNCXA6NJT0 531 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 ECHS1P30084 290 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 CXCR3P49682 368 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 MPP2Q14168 576 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 TCEA2Q15560 299 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 FAM187BQ17R55 369 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 FUT11Q495W5 492 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 RNASEH2BQ5TBB1 312 aaKnown RBP12.28□□□□□ -0.44
CHPF2-201ENST00000035307 GANCQ8TET4 914 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 PEBP4Q96S96 227 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 TTPALQ9BTX7 342 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 TMLHEQ9NVH6 421 aa12.28□□□□□ -0.44
CHPF2-201ENST00000035307 C2CD4BA6NLJ0 364 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 H0YGN5 161 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 PER2O15055 1255 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 GSTA4O15217 222 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 TM9SF1O15321 606 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 CHEK2O96017 543 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 SLC11A1P49279 550 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 CACNA2D1P54289 1103 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 SNX30Q5VWJ9 437 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 TMEM86AQ8N2M4 240 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 MAB21L3Q8N8X9 362 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 OR10T2Q8NGX3 314 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 PCDH19Q8TAB3 1148 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 ZSCAN18Q8TBC5 510 aaPredicted RBP12.27□□□□□ -0.44
CHPF2-201ENST00000035307 SMOQ99835 787 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 PIGVQ9NUD9 493 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 PCDHB12Q9Y5F1 795 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 NFS1Q9Y697 457 aa12.27□□□□□ -0.44
CHPF2-201ENST00000035307 TLL1O43897 1013 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 UNC5CO95185 931 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 STMN1P16949 149 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 PROZP22891 400 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 GMPRP36959 345 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 TTC3P53804 2025 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms