RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GDAP1Q8TB36 358 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 AZIN2Q96A70 460 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 APOPT1Q96IL0 206 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 SERAC1Q96JX3 654 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 TGS1Q96RS0 853 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 TRIM56Q9BRZ2 755 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 IL22Q9GZX6 179 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 MLXIPLQ9NP71 852 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 STK39Q9UEW8 545 aa14.61□□□□□ -0.07
RTFDC1-201ENST00000023939 NUP205Q92621 2012 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 MYO18AQ92614 2054 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 TRIM43BA6NCK2 446 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 TRIM49D1C9J1S8 452 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 OAS1P00973 400 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 DHRS4L1P0CG22 281 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 ALADP13716 330 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 FOXN2P32314 431 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 PPP3CCP48454 512 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 GEMP55040 296 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 YBEYP58557 167 aaPredicted RBP14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 CRADDP78560 199 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 DEFB103AP81534 67 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 CDH17Q12864 832 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 PARP15Q460N3 678 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 ALFQ53S48 1182 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 OTOP3Q7RTS5 596 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 CCDC197Q8NCU1 140 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 IGSF8Q969P0 613 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 TRIM43Q96BQ3 446 aaPredicted RBP14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 ZNF419Q96HQ0 510 aaPredicted RBP14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 PAWRQ96IZ0 340 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 VPS11Q9H270 941 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 MRPL42Q9Y6G3 142 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 FAM169AQ9Y6X4 670 aa14.6□□□□□ -0.07
RTFDC1-201ENST00000023939 SNX3O60493 162 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 RFPL1O75677 317 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 CNTN5O94779 1100 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 CSF2RAP15509 400 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 ITGB8P26012 769 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 ADRA1AP35348 466 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 RENBPP51606 427 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 BTG3Q14201 252 aaPredicted RBP14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 SPOUT1Q5T280 376 aaKnown RBP14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 HECTD3Q5T447 861 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 HHATQ5VTY9 493 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 RAP1GAP2Q684P5 730 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 NADSYN1Q6IA69 706 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 TMEM199Q8N511 208 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 TEX26Q8N6G2 289 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 DNAAF3Q8N9W5 541 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 TCP10LQ8TDR4 215 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 PLD4Q96BZ4 506 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 GRAMD1AQ96CP6 724 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 CERS2Q96G23 380 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 RBM22Q9NW64 420 aaKnown RBP eCLIP14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 SOX13Q9UN79 622 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 MAGED2Q9UNF1 606 aaPredicted RBP14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 YIPF1Q9Y548 306 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 RPS6KL1Q9Y6S9 549 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 DOCK4Q8N1I0 1966 aa14.59□□□□□ -0.07
RTFDC1-201ENST00000023939 ZCWPW2A0A1B0GU75 182 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 HMX2A2RU54 273 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 UGT1A9O60656 530 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 LPXNO60711 386 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 USP12O75317 370 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 HLA-DQB2P05538 268 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 URODP06132 367 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 TACR2P21452 398 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 PPM1AP35813 382 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 ETV4P43268 484 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 ANKRD20A4Q4UJ75 823 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 LVRNQ6Q4G3 990 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 SRLQ86TD4 932 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 TCEAL8Q8IYN2 117 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 ANKS4BQ8N8V4 417 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 ACMSDQ8TDX5 336 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 USP33Q8TEY7 942 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 HMCESQ96FZ2 354 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 CABS1Q96KC9 395 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 ZNF512Q96ME7 567 aaPredicted RBP14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 KIFC1Q9BW19 673 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 SLC25A51Q9H1U9 297 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 UGT1A7Q9HAW7 530 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 UGT1A10Q9HAW8 530 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 UGT1A8Q9HAW9 530 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 ENTPD7Q9NQZ7 604 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 FGFR1OP2Q9NVK5 253 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 PIH1D1Q9NWS0 290 aaKnown RBP14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 TRPM5Q9NZQ8 1165 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 GRID1Q9ULK0 1009 aa14.58□□□□□ -0.07
RTFDC1-201ENST00000023939 GOLGA6L7A0A1B0GV03 622 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 C2CD2LO14523 706 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 ACSL4O60488 711 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 PYGBP11216 843 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 ALDH1A3P47895 512 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 SLC11A2P49281 568 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 CREMQ03060 361 aa14.58□□□□□ -0.08
RTFDC1-201ENST00000023939 IL10RBQ08334 325 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms