RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ZDHHC18Q9NUE0 388 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 ARL8BQ9NVJ2 186 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 THAP1Q9NVV9 213 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 PRKAG3Q9UGI9 489 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 RIPK3Q9Y572 518 aa12.35□□□□□ -0.43
TSPAN9-201ENST00000011898 FAM25AB3EWG3 89 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 FAM25CB3EWG5 89 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 FAM25GB3EWG6 89 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 BNIP3LO60238 219 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 ZNF862O60290 1169 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 EDF1O60869 148 aaKnown RBP12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 SRP72O76094 671 aaKnown RBP12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 JCHAINP01591 159 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 C6orf222P0C671 652 aaPredicted RBP12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 ALADP13716 330 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 PCSK1P29120 753 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 PKNOX1P55347 436 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 FSTL1Q12841 308 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 OTUD3Q5T2D3 398 aaPredicted RBP12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 CDCA2Q69YH5 1023 aaPredicted RBP12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 TTC7BQ86TV6 843 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 RMDN1Q96DB5 314 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 CLPTM1LQ96KA5 538 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 RRN3P2A6NIE6 340 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 PTGES3LE9PB15 166 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 TIMM44O43615 452 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 PEX11AO75192 247 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 FBXO47Q5MNV8 452 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 LDLRAP1Q5SW96 308 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 DCAF12L1Q5VU92 463 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 FAAH2Q6GMR7 532 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 FAM117BQ6P1L5 589 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 CES3Q6UWW8 571 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 AMIGO2Q86SJ2 522 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 HTR3CQ8WXA8 447 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 NSMCE4AQ9NXX6 385 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 UBP1Q9NZI7 540 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 BTBD3Q9Y2F9 522 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 SESN1Q9Y6P5 492 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 FAM237BA0A1B0GVD1 139 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 AGRPO00253 132 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 USP12O75317 370 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 PRLP01236 227 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 ASLP04424 464 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 ENO2P09104 434 aaPredicted RBP12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 LSM3P62310 102 aaKnown RBP12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 ZNF235Q14590 738 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 DEFB115Q30KQ5 88 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 CYP2R1Q6VVX0 501 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 OTOAQ7RTW8 1153 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 POLNQ7Z5Q5 900 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 FBXW8Q8N3Y1 598 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 PCYOX1LQ8NBM8 494 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 OSBPL6Q9BZF3 934 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 SNTG2Q9NY99 539 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 ITGA11Q9UKX5 1188 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
TSPAN9-201ENST00000011898 WDR27A2RRH5 827 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 TRIM24O15164 1050 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 DCXO43602 365 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 TBX10O75333 385 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 ADSSP30520 456 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 TTKP33981 857 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 CSE1LP55060 971 aaKnown RBP12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 BST2Q10589 180 aaKnown RBP12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 ARMCX4Q5H9R4 360 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 ZC3H12BQ5HYM0 836 aaKnown RBP12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 C16orf46Q6P387 395 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 C6orf89Q6UWU4 347 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 CLNKQ7Z7G1 428 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 UNC45BQ8IWX7 931 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 SPOCK2Q92563 424 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 APBB2Q92870 758 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 KLHL32Q96NJ5 620 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 YIPF2Q9BWQ6 316 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 SPATA2Q9UM82 520 aa12.33□□□□□ -0.43
TSPAN9-201ENST00000011898 PDLIM1O00151 329 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 CCRL2O00421 344 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 PSMA4P25789 261 aaKnown RBP12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 KRT6CP48668 564 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 C11orf91Q3C1V1 193 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 PDPK2PQ6A1A2 396 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 TUBA3EQ6PEY2 450 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 LUZP2Q86TE4 346 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 SAPCD2Q86UD0 394 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 KYQ8NBH2 561 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 JOSD2Q8TAC2 188 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 OSMRQ99650 979 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 EBF3Q9H4W6 596 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 TRPV5Q9NQA5 729 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 CHST12Q9NRB3 414 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 FADS3Q9Y5Q0 445 aa12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 TRDMT1O14717 391 aaKnown RBP12.33□□□□□ -0.44
TSPAN9-201ENST00000011898 MED26O95402 600 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms