RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 MYLK3Q32MK0 819 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 EML3Q32P44 896 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 TREML2Q5T2D2 321 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 SEL1L3Q68CR1 1132 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 FBXO16Q8IX29 292 aaPredicted RBP10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 LILRA2Q8N149 483 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 ACVR1CQ8NER5 493 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 ZFP28Q8NHY6 868 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 URGCPQ8TCY9 931 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 SLC35B4Q969S0 331 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 MFSD3Q96ES6 412 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 PKP2Q99959 881 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 NAT9Q9BTE0 207 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 UNKQ9C0B0 810 aaKnown RBP10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 PTTG2Q9NZH5 202 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 SLC39A10Q9ULF5 831 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 GINS2Q9Y248 185 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 NME7Q9Y5B8 376 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 PSME4Q14997 1843 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 TMEM221A6NGB7 291 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 GLDCP23378 1020 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 SULT1E1P49888 294 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 MYBPC1Q00872 1141 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 CEACAM7Q14002 265 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 SPANXN3Q5MJ09 141 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 ZNF280DQ6N043 979 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 C16orf87Q6PH81 154 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 PTAR1Q7Z6K3 402 aaPredicted RBP10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 ZSCAN18Q8TBC5 510 aaPredicted RBP10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 DHRS1Q96LJ7 313 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 MRPL1Q9BYD6 325 aaKnown RBP10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 PRPF19Q9UMS4 504 aaKnown RBP10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 EVPLQ92817 2033 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 HACD1B0YJ81 288 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 AP1G1O43747 822 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 TNFAIP8O95379 198 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 TPH1P17752 444 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 AVPR1AP37288 418 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 PTPN9P43378 593 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 LIMK2P53671 638 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 SNX16P57768 344 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 RPL26P61254 145 aaKnown RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 CDKL1Q00532 357 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 FOXD4Q12950 439 aaPredicted RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 PDK1Q15118 436 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 NRF1Q16656 503 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 PKDCCQ504Y2 493 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 SLC44A4Q53GD3 710 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 GLRA4Q5JXX5 417 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 SH2D4BQ5SQS7 431 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 CELF3Q5SZQ8 465 aaKnown RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 METTL21CQ5VZV1 264 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 LRRC40Q9H9A6 602 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 WDR41Q9HAD4 459 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 IARS2Q9NSE4 1012 aaKnown RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 BFARQ9NZS9 450 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 RAB26Q9ULW5 256 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 FIS1Q9Y3D6 152 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 ANK1P16157 1881 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 TRIM43BA6NCK2 446 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 PHGDHO43175 533 aaKnown RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 FAM58BPP0C7Q3 252 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 NELFEP18615 380 aaKnown RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 GRIA4P48058 902 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 NAGLUP54802 743 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 PITX1P78337 314 aaPredicted RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 ZNF423Q2M1K9 1284 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 ARL13AQ5H913 290 aaPredicted RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 AMIGO2Q86SJ2 522 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 DEFB106AQ8N104 65 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 CEP70Q8NHQ1 597 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 NPAS2Q99743 824 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 MRPS26Q9BYN8 205 aaKnown RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 SEMA6AQ9H2E6 1030 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 EPB41L1Q9H4G0 881 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 C20orf96Q9NUD7 363 aaPredicted RBP10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 ADA2Q9NZK5 511 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 VANGL2Q9ULK5 521 aa10.71□□□□□ -0.69
CX3CL1-201ENST00000006053 RLFQ13129 1914 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 A0A1B0GTW7 788 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 TMEM114B3SHH9 223 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 HDAC3O15379 428 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 HBP1O60381 514 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 TOMM70O94826 608 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 ME2P23368 584 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 EDNRBP24530 442 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 RPL14P50914 215 aaKnown RBP10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 NME3Q13232 169 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 DCAF6Q58WW2 860 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 CERCAMQ5T4B2 595 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 PLPPR4Q7Z2D5 763 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 RP9Q8TA86 221 aaKnown RBP10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 RNF139Q8WU17 664 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 NLRP7Q8WX94 980 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 TSNARE1Q96NA8 513 aa10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 ACE2Q9BYF1 805 aaPredicted RBP10.71□□□□□ -0.7
CX3CL1-201ENST00000006053 ZDHHC2Q9UIJ5 367 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms