RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 AKAP5P24588 427 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 NMBRP28336 390 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 ADIGQ0VDE8 80 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 NRF1Q16656 503 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 KIZQ2M2Z5 673 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 PABPC1LQ4VXU2 614 aaKnown RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 SPANXN3Q5MJ09 141 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 OTUD1Q5VV17 481 aaPredicted RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 EXOC8Q8IYI6 725 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 MARVELD2Q8N4S9 558 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 PCDH20Q8N6Y1 951 aaKnown RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 GRIN3AQ8TCU5 1115 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 KCTD4Q8WVF5 259 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 KBTBD7Q8WVZ9 684 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 ACE2Q9BYF1 805 aaPredicted RBP14.3□□□□□ -0.12
USH1C-201ENST00000005226 FAM96AQ9H5X1 160 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 GOLGA2P5Q9HBQ8 144 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 PIM2Q9P1W9 311 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 RIMS3Q9UJD0 308 aa14.3□□□□□ -0.12
USH1C-201ENST00000005226 SMIM31A0A1B0GVY4 71 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 HACD1B0YJ81 288 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 M0QYT0 321 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 SPTLC1O15269 473 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 DENRO43583 198 aaKnown RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 USP2O75604 605 aaPredicted RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 HDCP19113 662 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 PCSK6P29122 969 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 RPL5P46777 297 aaKnown RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 BST2Q10589 180 aaKnown RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 ADGRE1Q14246 886 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 PIGGQ5H8A4 983 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 OLFML2BQ68BL8 750 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 SEL1L3Q68CR1 1132 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 AMIGO2Q86SJ2 522 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 CCNYL1Q8N7R7 359 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 ANKRD52Q8NB46 1076 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 APBA2Q99767 749 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 LRRC40Q9H9A6 602 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 WDR41Q9HAD4 459 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 OXSMQ9NWU1 459 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 RUVBL2Q9Y230 463 aaKnown RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 HEMK1Q9Y5R4 338 aaPredicted RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 NUP205Q92621 2012 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 H3BSA7 217 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 RNASEH2AO75792 299 aaKnown RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 CSPG5O95196 566 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 FGFR3P22607 806 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 IGFBP6P24592 240 aaPredicted RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 ACAT1P24752 427 aaKnown RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 PTPN3P26045 913 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 PRDX6P30041 224 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 GNL1P36915 607 aaPredicted RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 MAGEA12P43365 314 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 RPL14P50914 215 aaKnown RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 MPP3Q13368 585 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 CYTH1Q15438 398 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 POTEAQ6S8J7 498 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 CLEC14AQ86T13 490 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 PNPLA1Q8N8W4 532 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 FAM81AQ8TBF8 368 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 VPS39Q96JC1 886 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 PCDHAC1Q9H158 963 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 ERAP1Q9NZ08 941 aa14.29□□□□□ -0.12
USH1C-201ENST00000005226 C6orf203Q9P0P8 240 aaPredicted RBP14.29□□□□□ -0.12
USH1C-201ENST00000005226 KPNA7A9QM74 516 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 ZNF487B1APH4 448 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 HDAC3O15379 428 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 CNMDO75829 334 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 SETSIPP0DME0 302 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 MATKP42679 507 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 BAG6P46379 1132 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 FAM187BQ17R55 369 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 RPS27LQ71UM5 84 aaKnown RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 PIGZQ86VD9 579 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 KCNMB4Q86W47 210 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 PSTKQ8IV42 348 aaKnown RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 TMEM151AQ8N4L1 468 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 MLPHQ9BV36 600 aaPredicted RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 EIF2B3Q9NR50 452 aaKnown RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 PIGVQ9NUD9 493 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 BFARQ9NZS9 450 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 ATXN10Q9UBB4 475 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 EEF2KO00418 725 aaKnown RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 LGALS2P05162 132 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 CD68P34810 354 aaPredicted RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 GLUD2P49448 558 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 ART3Q13508 389 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 MAP7Q14244 749 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 RARS2Q5T160 578 aaKnown RBP14.28□□□□□ -0.12
USH1C-201ENST00000005226 ZNF280DQ6N043 979 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 C16orf89Q6UX73 402 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 SLC41A1Q8IVJ1 513 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 LSMEM2Q8N112 164 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 USP33Q8TEY7 942 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 ATP6V1E2Q96A05 226 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 NAT9Q9BTE0 207 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 CDHR5Q9HBB8 845 aa14.28□□□□□ -0.12
USH1C-201ENST00000005226 ADA2Q9NZK5 511 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms