RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Polr3hQ9D2C6 204 aaKnown RBP13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Syap1Q9D5V6 365 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Olfr711Q9EPG2 314 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Igkv5-45A0A0B4J1J1 115 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Il12aP43431 215 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Msx2Q03358 267 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Arid5aQ3U108 590 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Mansc4Q3UU94 337 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Trcg1Q58Y74 825 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Rasa4Q6PFQ7 802 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Sytl5Q80T23 753 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Baiap2l2Q80Y61 522 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Gpc2Q8BKV1 579 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Gemin2Q9CQQ4 269 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Trmt11Q9CWH5 460 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Lilra5D3Z7A9 295 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Dpysl2O08553 572 aaKnown RBP13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Zfy2P20662 777 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Sycp3P70281 254 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Cdh9P70407 786 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 HmgcrQ01237 887 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pdss1Q33DR2 409 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Itm2aQ61500 263 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Map3k7Q62073 579 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Shkbp1Q6P7W2 704 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Ube2q1Q7TSS2 422 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Il17reQ8BH06 637 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Slco2b1Q8BXB6 683 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Zfp263Q8CF60 680 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Traf3ip2Q8N7N6 555 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Coq6Q8R1S0 476 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Tm9sf1Q9DBU0 606 aa13.7□□□□□ -0.22
Rnf4-204ENSMUST00000182047 C7D3YXF5 845 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Vmn2r59E9PUT5 865 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Tmem265E9Q8G3 109 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Morc3F7BJB9 942 aaKnown RBP13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Gm3383J3QQ59 259 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Oaz2O08608 189 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Tnfrsf11bO08712 401 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Il2P04351 169 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 AlplP09242 524 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Sdr16c6Q05A13 316 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 March5Q3KNM2 278 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Serac1Q3U213 654 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Prkaa1Q5EG47 559 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Mapre1Q61166 268 aaKnown RBP13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Mvb12bQ6KAU4 317 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Gpr142Q7TQN9 365 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Ctxn3Q8BXZ0 80 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pak5Q8C015 719 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Ephb1Q8CBF3 984 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Agap3Q8VHH5 910 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Cog2Q921L5 731 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Mrps17Q9CQE3 120 aaKnown RBP13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Ror1Q9Z139 937 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Cyp4a12bA2A974 508 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Smok3aC0HKC8 504 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Smok3bC0HKC9 504 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Klf6O08584 283 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Dnase1l3O55070 310 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Il1rapl1P59823 695 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 4930430A15RikQ05AC5 485 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pecam1Q08481 727 aaKnown RBP13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 TchpQ3TVW5 497 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Spag6Q3V0U9 509 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Xkr5Q5GH66 676 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Fbxo39Q5NBU5 443 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 RfflQ6ZQM0 377 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Olfr867Q7TRF3 331 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Olfr538Q7TRT5 310 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Q80Y73 168 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Prr11Q8BHE0 368 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Cyp4a12aQ91WL5 508 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Npffr2Q924H0 417 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pacsin3Q99JB8 424 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 QpctQ9CYK2 362 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Eef1akmt2Q9D853 244 aa13.69□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Zfc3h1B2RT41 1992 aaKnown RBP13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Ankfn1A0A140LIW7 1083 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pold2O35654 469 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Timm13P62075 95 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 RalgdsQ03385 852 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Grm5Q3UVX5 1203 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Trim24Q64127 1051 aaKnown RBP13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Capn11Q6J756 714 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Ccdc68Q8BVC4 333 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Q8CIL4 281 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Nudcd3Q8R1N4 363 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pglyrp2Q8VCS0 530 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Olfr784Q8VFZ9 319 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Hkdc1Q91W97 915 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Pdk3Q922H2 415 aaKnown RBP13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 AenQ9CZI9 336 aaKnown RBP13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Spatc1lQ9D9W0 342 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 NumbQ9QZS3 653 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Ptpn4Q9WU22 926 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Nme3Q9WV85 169 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 PtprfA2A8L5 1898 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 9330159F19RikD3Z623 648 aa13.68□□□□□ -0.22
Rnf4-204ENSMUST00000182047 Spin2fJ3QPU0 254 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms