RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 CartptP56388 129 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Ezh1P70351 747 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Dlg1Q811D0 905 aaKnown RBP18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 SgtaQ8BJU0 315 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Sbk1Q8QZX0 417 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Slc15a4Q91W98 574 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Slc40a1Q9JHI9 570 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Rpl9-ps1S4R1R7 191 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Ggta1l1A2AUQ7 319 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Pmm1O35621 262 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Slc22a2O70577 553 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Faf1P54731 649 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Erbb2P70424 1256 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Adrbk2Q3UYH7 688 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Hspa1aQ61696 641 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Mark4Q8CIP4 752 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Scrn1Q9CZC8 414 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Mau2Q9D2X5 619 aaKnown RBP18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Myo5cE9Q1F5 1742 aa18.78■□□□□ 0.6
Sort1-203ENSMUST00000135636 Gm5565A0A0G2JGB2 317 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Polr1bP70700 1135 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Thap3Q8BJ25 218 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 ItchQ8C863 864 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Vps35Q9EQH3 796 aaKnown RBP18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 ChmlQ9QZD5 621 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Rbck1Q9WUB0 508 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Hs3st1O35310 311 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Slc2a6Q3UDF0 497 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Cd34Q64314 382 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Fnip1Q68FD7 1165 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 EngaseQ8BX80 734 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Ccser1Q8C0C4 895 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Q8CCC3 530 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Lpgat1Q91YX5 370 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 MydgfQ9CPT4 166 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Stx11Q9D3G5 287 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Aldh6a1Q9EQ20 535 aaKnown RBP18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Scnn1gQ9WU39 655 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Mmp3P28862 477 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Ttc29Q80VM3 471 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Ssh3Q8K330 649 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 VillQ91YD6 859 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Slc25a14Q9Z2B2 325 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Gm17093F6XGJ4 214 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 H2-M9O19442 342 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Cyp2a4P15392 494 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Cyp2a5P20852 494 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Tcea3P23881 347 aaKnown RBP18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Npr3P70180 536 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 R3hdm4Q4VBF2 262 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Dalrd3Q6PJN8 538 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Zdhhc19Q810M5 347 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Adgrf1Q8VEC3 908 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Fkbp6Q91XW8 327 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 Aldh9a1Q9JLJ2 494 aa18.77■□□□□ 0.6
Sort1-203ENSMUST00000135636 CpdO89001 1377 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Rrn3B2RS91 656 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Olfr1022L7MTT3 315 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Hsd17b7O88736 334 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 SgcgP82348 291 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Eps8Q08509 821 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Slc26a2Q62273 739 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 P3h4Q8K2B0 443 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Olfr693Q8VF89 316 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Arl10Q9QXJ4 243 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Trpm1Q2TV84 1622 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Aldoart1A6ZI46 419 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Nxpe3B9EKK6 559 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Vmn2r38G3UYA8 861 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Vmn2r33K7N705 861 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Vmn2r44L7N2E1 861 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Krt6aP50446 553 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Gga3Q8BMI3 718 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Ddx50Q99MJ9 734 aaKnown RBP18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Agpat5Q9D1E8 365 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Cacng4Q9JJV4 327 aa18.77■□□□□ 0.59
Sort1-203ENSMUST00000135636 Olfr271-ps1A0A1L1SQH2 283 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Etnk2A7MCT6 385 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Bcap31Q61335 245 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Abcg2Q7TMS5 657 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Krt75Q8BGZ7 551 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Ccz1Q8C1Y8 480 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Gatad2aQ8CHY6 629 aaKnown RBP18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Pstpip1P97814 415 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Ipcef1Q5DU31 406 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Klra6Q60653 266 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Mtnr1aQ61184 353 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Ifit3Q64345 403 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 DaglbQ91WC9 669 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Nudt8Q9CR24 210 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Mrpl17Q9D8P4 176 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Znf804aA2AKY4 1200 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Pold2O35654 469 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Aldh3a1P47739 453 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Fam46cQ5SSF7 391 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Colgalt2Q6NVG7 625 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Ldlrap1Q8C142 308 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Mrpl46Q9EQI8 283 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Wnt6P22727 364 aa18.76■□□□□ 0.59
Sort1-203ENSMUST00000135636 Plin2P43883 425 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms