RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Trappc5Q9CQA1 188 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Vps35Q9EQH3 796 aaKnown RBP18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Vmn2r15L7N2A0 855 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Cd151O35566 253 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Catsper4Q8BVN3 442 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Mpp6Q9JLB0 553 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 GabrqQ9JLF1 638 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Apol8A2VDH7 339 aaKnown RBP18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 PigrO70570 771 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Plpp4Q0VBU9 271 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Aarsd1Q3THG9 412 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Pphln1Q8K2H1 381 aaKnown RBP18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Exoc2Q9D4H1 924 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Gm44511A0A0N4SW10 223 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Fbln1Q08879 705 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Lipo3Q3UT41 399 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Znf513Q6PD29 541 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Dna2Q6ZQJ5 1062 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Lrrc15Q80X72 579 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Pcid2Q8BFV2 399 aaKnown RBP18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Cgref1Q8R1U2 281 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Rec114Q9CWH4 259 aa18.66■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Dcpp2E9PYC2 171 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Olfr694K7N641 315 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Dcpp1L7N1X9 171 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Akr1b7P21300 316 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Nckap1P28660 1128 aaKnown RBP18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Polr2lP62876 67 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Gpbp1l1Q6NZP2 473 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Slitrk2Q810C0 846 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Acad10Q8K370 1069 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Ces2aQ8QZR3 558 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Pramel1Q99MW3 458 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Cyp4a29A0A087WPC3 509 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Ccdc120A2AEV7 629 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 ItgavP43406 1044 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Phactr1Q2M3X8 580 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Kctd8Q50H33 476 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 VwdeQ6DFV8 926 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Trpa1Q8BLA8 1125 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 UstQ8BUB6 407 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Smad3Q8BUN5 425 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Il33Q8BVZ5 266 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Cwf19l1Q8CI33 537 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 N4bp2l2Q8JZS6 575 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Plekhh3Q8VCE9 796 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Stx11Q9D3G5 287 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Prmt2Q9R144 448 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Scrg1O88745 98 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Ptpn5P54830 541 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Sparcl1P70663 650 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Slfn4Q3UV66 602 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Axdnd1Q3UZ57 424 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Rsph1Q8VIG3 301 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Pcdhb17Q91VD8 799 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 0610012G03RikA0A0J9YTR2 95 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Hnf4aP49698 474 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Psmb4P99026 264 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 HexdcQ3U4H6 486 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Tnfaip2Q61333 691 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Ddx55Q6ZPL9 600 aaKnown RBP18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Teddm1aQ810U2 305 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Pcdha1Q91Y21 948 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 DeraQ91YP3 318 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Smg9Q9DB90 520 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Slc26a3Q9WVC8 757 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Bcl10Q9Z0H7 233 aa18.65■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Xlr5bA2BI50 236 aa18.64■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Igf2bp1O88477 577 aaKnown RBP18.64■□□□□ 0.58
Scaf11-201ENSMUST00000047835 MafbP54841 323 aa18.64■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Slc20a1Q61609 681 aa18.64■□□□□ 0.58
Scaf11-201ENSMUST00000047835 IgflQ6B9Z0 140 aa18.64■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Cdc14bQ6PFY9 485 aa18.64■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Pwp1Q99LL5 501 aaKnown RBP18.64■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Copg2Q9QXK3 871 aa18.64■□□□□ 0.58
Scaf11-201ENSMUST00000047835 Gm4869A0A1B0GSG7 984 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Ercc2O08811 760 aaKnown RBP18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Pou1f1Q00286 291 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Ints6Q6PCM2 883 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Sox30Q8CGW4 782 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Haus5Q9D786 619 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Prl2b1Q9DAZ2 228 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Fam46dB1ATX6 390 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 C2cd2E9Q3C1 696 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Fam35aQ3UEN2 891 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 B3glctQ8BHT6 489 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Slc43a1Q8BSM7 564 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Cndp2Q9D1A2 475 aaKnown RBP18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 B020011L13RikA0A087WQI7 412 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Klhl18A0A0G2JGN5 579 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Rpl21O09167 160 aaKnown RBP18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Sypl2O89104 264 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Ctps1P70698 591 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Olfr26Q7TRB7 308 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Nle1Q8VEJ4 485 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Pcdhb18Q91Y02 792 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Cybrd1Q925G2 290 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Olfr933Q9EQA0 308 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Rdh14Q9ERI6 334 aa18.64■□□□□ 0.57
Scaf11-201ENSMUST00000047835 Serpina6Q06770 397 aa18.64■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms