RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Ppp1r12aQ9DBR7 1029 aaKnown RBP8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 C1qtnf1Q9QXP7 281 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Epm2aQ9WUA5 330 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 FancfE9Q5Z5 343 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Lrrc10bG3XA50 292 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Klf6O08584 283 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 C1qbpO35658 278 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 P01644 108 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 P01645 108 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 P01646 108 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 P01647 108 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Ap2a1P17426 977 aaKnown RBP8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Atxn10P28658 475 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Dpf3P58269 378 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Mpp1P70290 466 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Otol1Q4ZJM7 482 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Xkr5Q5GH66 676 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Gpr19Q61121 415 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Abcg2Q7TMS5 657 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 C2cd2lQ80X80 706 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Taf10Q8K0H5 218 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Rps6kl1Q8R2S1 544 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Eml3Q8VC03 897 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Tmem30aQ8VEK0 364 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Msi2Q920Q6 346 aaKnown RBP8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 KlbQ99N32 1043 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Pgm1Q9D0F9 562 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Syap1Q9D5V6 365 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Sun1Q9D666 913 aaKnown RBP8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Capn7Q9R1S8 813 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Nupr1Q9WTK0 80 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Tmem115Q9WUH1 350 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Ddx39bQ9Z1N5 428 aaKnown RBP8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Atg2aQ6P4T0 1914 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Mroh5E9PUJ8 762 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Ifi206G3UZV2 921 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Calhm3J3QMI4 347 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Vmn2r88L7N1W8 857 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Man2b1O09159 1013 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Pold2O35654 469 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 FpgsP48760 587 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Fbp2P70695 339 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 ItkQ03526 625 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Heatr9Q5QNV8 569 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Gpr65Q61038 337 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 PhgdhQ61753 533 aaKnown RBP8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 MafkQ61827 156 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Tigd3Q7TM95 470 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Slc16a9Q7TM99 508 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Fam204aQ8C6C7 236 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Q8CDN1 933 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Clip4Q8CI96 704 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Fbxw7Q8VBV4 629 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Slc13a3Q91Y63 600 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Rwdd4Q9CPR1 188 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Setd6Q9CWY3 473 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Subh2bvQ9D9Z7 123 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Pgam1Q9DBJ1 254 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Rsrc1Q9DBU6 334 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Trpc4Q9QUQ5 974 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Syt5Q9R0N5 386 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Col5a3Q9JLI2 1739 aa8.61□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Gm15262A0A140LIQ5 728 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Pcna-ps2A0A140T8V5 261 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Snx3O70492 162 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Hmga1P17095 107 aaKnown RBP8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 PcnaP17918 261 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Il12bP43432 335 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Gabrb3P63080 473 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Nr2c1Q505F1 590 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Mxd4Q60948 209 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Dnajc8Q6NZB0 253 aaKnown RBP8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Rps27lQ6ZWY3 84 aaKnown RBP8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Deup1Q7M6Y5 601 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Olfr1128Q7TR47 311 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Rbm22Q8BHS3 420 aaKnown RBP8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Ccdc184Q8BMK5 191 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Ccdc68Q8BVC4 333 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Itpk1Q8BYN3 419 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Cabs1Q8C633 391 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Lrif1Q8CDD9 755 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Ube2q2Q8K2Z8 378 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Nudcd3Q8R1N4 363 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Nup85Q8R480 656 aaKnown RBP8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Nle1Q8VEJ4 485 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Pcdhb11Q91UZ8 797 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Snx15Q91WE1 337 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 RpainQ9CWY9 219 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Sept6Q9R1T4 434 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Msl3Q9WVG9 525 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Net1Q9Z206 595 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Nup205A0A0J9YUD5 2061 aaKnown RBP8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Gm45861A0A1B0GRY3 1923 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Zfp963D3Z2T8 383 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Zfp212G3X8R7 492 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Trim55G3X8Y1 545 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Sema3aO08665 772 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 E2f6O54917 272 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Tnk2O54967 1055 aa8.6□□□□□ -1.03
Ptchd1-201ENSMUST00000038665 Hcn2O88703 863 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms