RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm3532M0QWL4 194 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Galnt4O08832 578 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AprtP08030 180 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AcadmP45952 421 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Aldh2P47738 519 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Atoh1P48985 351 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Epb41l4aP52963 686 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AdslP54822 484 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Stard3Q61542 446 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Zdhhc15Q8BGJ0 337 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 MtrrQ8C1A3 696 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Guf1Q8C3X4 651 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 TdrpQ8C5P7 182 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Btbd9Q8C726 612 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Eif3mQ99JX4 374 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gemin6Q9CX53 166 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Akt1s1Q9D1F4 257 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Snrnp48Q9D361 337 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vnn3Q9QZ25 500 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fut8Q9WTS2 575 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tsc22d3Q9Z2S7 137 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rims2Q9EQZ7 1530 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fgf10O35565 209 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Slc16a2O70324 545 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mtnd3P03899 115 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Clcn3P51791 818 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tespa1Q3U132 458 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prickle1Q3U5C7 832 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mapkapk3Q3UMW7 384 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Dlg4Q62108 724 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nup62Q63850 526 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tas2r104Q7M723 302 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Q8BGA7 448 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Q8BGK9 164 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Arhgap28Q8BN58 729 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Snapc1Q8K0S9 389 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hecw1Q8K4P8 1604 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Plbd1Q8VCI0 550 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rem2Q8VEL9 341 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr541Q8VGM0 312 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr1122Q8VGT9 326 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 WwoxQ91WL8 414 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Adgre4Q91ZE5 689 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 GhdcQ99J23 532 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PigxQ99LV7 254 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Myl9Q9CQ19 172 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ssxb9A2BI93 185 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Klhl4B1AZR0 717 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm15448F6PZL4 682 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rc3h2P0C090 1187 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pla2g6P97819 807 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 RelaQ04207 549 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Trappc9Q3U0M1 1148 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Klra3Q64329 266 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ddhd1Q80YA3 547 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mup21Q80YX8 181 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Siglec10Q80ZE3 688 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Trmt2aQ8BNV1 574 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rap2cQ8BU31 183 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Galnt18Q8K1B9 622 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Adam32Q8K410 754 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ndufb5Q9CQH3 189 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 GmfbQ9CQI3 142 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Khdrbs2Q9WU01 349 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Slc6a16A0A1L1SR47 742 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm5930D3Z257 264 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Kifc5bE9PUA5 672 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm6882J3KMT3 313 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Atn1O35126 1175 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AmhP27106 555 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm10662Q3UT86 313 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pydc3Q3V3Q4 588 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gcnt3Q5JCT0 437 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Atp13a3Q5XF89 1219 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Bcl2l1Q64373 233 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gja6Q6S5G4 283 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AY358078Q6UY53 465 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ldoc1Q7TPY9 151 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pex26Q8BGI5 305 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Zhx3Q8C0Q2 951 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Map3k21Q8VDG6 1002 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rbm47Q91WT8 590 aaKnown RBP9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Carm1Q9WVG6 608 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Sirpb1aA0A0A6YYP6 397 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pramel3A2AHA7 463 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm7903A2AWL1 463 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cyp2j12G3UXT0 502 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Slc6a2O55192 617 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Grk4O70291 574 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 CkmP07310 381 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nos2P29477 1144 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ccng1P51945 294 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ephb2P54763 986 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Abhd15Q5F2F2 459 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 N4bp1Q6A037 893 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Awat2Q6E1M8 333 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr169Q7TS53 313 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Chtf18Q8BIW9 969 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Btnl9Q8BJE2 536 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Erich5Q8K0S2 362 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms