RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 HOXC11O43248 304 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 CHRNA3P32297 505 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 ACVRL1P37023 503 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 COILP38432 576 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 CSKP41240 450 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 XRCC4Q13426 336 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 AFMIDQ63HM1 303 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 GSTA5Q7RTV2 222 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 CDKL3Q8IVW4 592 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 C12orf50Q8NA57 414 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 FIBINQ8TAL6 211 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 TFB1MQ8WVM0 346 aaKnown RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 ARHGEF2Q92974 986 aaKnown RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 NXPE3Q969Y0 559 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 MAGEH1Q9H213 219 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 ABCB8Q9NUT2 735 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 KIAA1522Q9P206 1035 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-230ENST00000641927 IGSF9Q9P2J2 1179 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 VPS28Q9UK41 221 aa17.9■□□□□ 0.46
PHGDH-230ENST00000641927 RIOK3O14730 519 aaKnown RBP17.89■□□□□ 0.45
PHGDH-230ENST00000641927 MZF1P28698 734 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-230ENST00000641927 LMAN2Q12907 356 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 ITPRIPL2Q3MIP1 535 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 SLC45A4Q5BKX6 768 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 TTC27Q6P3X3 843 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 ARHGAP36Q6ZRI8 547 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 SLC44A3Q8N4M1 653 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 ZNF557Q8N988 423 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-230ENST00000641927 LRRN4CLQ8ND94 238 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 CSGALNACT1Q8TDX6 532 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 NKD2Q969F2 451 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-230ENST00000641927 TMEM121Q9BTD3 319 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 ATP13A1Q9HD20 1204 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 DNAJC17Q9NVM6 304 aaKnown RBP17.89■□□□□ 0.45
PHGDH-230ENST00000641927 SEPT10Q9P0V9 454 aa17.89■□□□□ 0.45
PHGDH-230ENST00000641927 NUP205Q92621 2012 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 HACD1B0YJ81 288 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 SGK1O00141 431 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 SLU7O95391 586 aaKnown RBP17.88■□□□□ 0.45
PHGDH-230ENST00000641927 CD70P32970 193 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 ETFBP38117 255 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 FNTAP49354 379 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 OXCT1P55809 520 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 RNF43Q68DV7 783 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 HEATR6Q6AI08 1181 aaKnown RBP17.88■□□□□ 0.45
PHGDH-230ENST00000641927 DRICH1Q6PGQ1 229 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-230ENST00000641927 ZNF783Q6ZMS7 281 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 HDAC11Q96DB2 347 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 QKIQ96PU8 341 aaKnown RBP eCLIP17.88■□□□□ 0.45
PHGDH-230ENST00000641927 FERMT1Q9BQL6 677 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 FEM1AQ9BSK4 669 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 SP110Q9HB58 689 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 AMACRQ9UHK6 382 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 IPO11Q9UI26 975 aaKnown RBP17.88■□□□□ 0.45
PHGDH-230ENST00000641927 HPCAL4Q9UM19 191 aa17.88■□□□□ 0.45
PHGDH-230ENST00000641927 KIF26AQ9ULI4 1882 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-230ENST00000641927 CBX4O00257 560 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 KCNN4O15554 427 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 CACNG3O60359 315 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 RBL1P28749 1068 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 HLA-FP30511 346 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 MRPS25P82663 173 aaKnown RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 PPIDQ08752 370 aaKnown RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 SERINC3Q13530 473 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 OASLQ15646 514 aaKnown RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 KCTD19Q17RG1 926 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 C12orf40Q86WS4 652 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 FAM71DQ8N9W8 422 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 NOA1Q8NC60 698 aaKnown RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 ATL2Q8NHH9 583 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 BRD8Q9H0E9 1235 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 GGA2Q9UJY4 613 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 LOC730098B7Z3J9 87 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 ARNTLO00327 626 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 TRIM24O15164 1050 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 MAFKO60675 156 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 TULP3O75386 442 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 ITGAVP06756 1048 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 GJA4P35212 333 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 DGKGP49619 791 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 DR1Q01658 176 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 LMNB2Q03252 620 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 PRKD1Q15139 912 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 ASTLQ6HA08 431 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 LEKR1Q6ZMV7 388 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 LRRC49Q8IUZ0 686 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 CCDC13Q8IYE1 715 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 APCDD1Q8J025 514 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 CCDC26Q8TAB7 109 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 GRK7Q8WTQ7 553 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 HTR3CQ8WXA8 447 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 RUNDC3BQ96NL0 473 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 SLC2A11Q9BYW1 496 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 DEC1Q9P2X7 70 aa17.87■□□□□ 0.45
PHGDH-230ENST00000641927 FEZ2Q9UHY8 353 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 DRG1Q9Y295 367 aaKnown RBP17.87■□□□□ 0.45
PHGDH-230ENST00000641927 BCLAF3A2AJT9 711 aaKnown RBP17.86■□□□□ 0.45
PHGDH-230ENST00000641927 J3KR12 359 aa17.86■□□□□ 0.45
PHGDH-230ENST00000641927 KCNK1O00180 336 aa17.86■□□□□ 0.45
PHGDH-230ENST00000641927 ECEL1O95672 775 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms