RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PAGE1O75459 146 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 SLC2A3P11169 496 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 CORO1AP31146 461 aaKnown RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 ADRA1BP35368 520 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 AVPR1AP37288 418 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 DHPSP49366 369 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 PEX5P50542 639 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 AIF1P55008 147 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 IRX4P78413 519 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 SLC7A9P82251 487 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 COG7P83436 770 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 ZNF211Q13398 564 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 CA9Q16790 459 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 ATP13A4Q4VNC1 1196 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 BOLA3Q53S33 107 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 ODF2Q5BJF6 829 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 TRIM61Q5EBN2 209 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 DNTTIP2Q5QJE6 756 aaKnown RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 ERMARDQ5T6L9 678 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 DCAF12L1Q5VU92 463 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 PAPD7Q5XG87 772 aaKnown RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 SYT13Q7L8C5 426 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 PSTKQ8IV42 348 aaKnown RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 CCDC50Q8IVM0 306 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 CMTM8Q8IZV2 173 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 CHCHD4Q8N4Q1 142 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 TTC16Q8NEE8 873 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 TSTD1Q8NFU3 115 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 EXD1Q8NHP7 514 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 KIF18AQ8NI77 898 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 RAPGEF5Q92565 580 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 RSPRY1Q96DX4 576 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 RBM41Q96IZ5 413 aaKnown RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 LRIG1Q96JA1 1093 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 KCTD15Q96SI1 283 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 OSBPL9Q96SU4 736 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 GKN1Q9NS71 199 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 EVLQ9UI08 416 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-228ENST00000641847 SNX10Q9Y5X0 201 aa9.69□□□□□ -0.86
PHGDH-228ENST00000641847 LEFTY2O00292 366 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 MAP3K13O43283 966 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 SRGAP2O75044 1071 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 STC2O76061 302 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 PRAMEF12O95522 483 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 CD48P09326 243 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 TCP1P17987 556 aaKnown RBP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 CXCR5P32302 372 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 GGCXP38435 758 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 HARS2P49590 506 aaKnown RBP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 CDH6P55285 790 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 TNK2Q07912 1038 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 USP4Q13107 963 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 MTA1Q13330 715 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 RUNX3Q13761 415 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 DMC1Q14565 340 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 DPYSL2Q16555 572 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 PPP6R3Q5H9R7 873 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 SEL1L2Q5TEA6 688 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 PIK3R6Q5UE93 754 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 PKN3Q6P5Z2 889 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 SPOCD1Q6ZMY3 1216 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 LPCAT2Q7L5N7 544 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 DDX42Q86XP3 938 aaKnown RBP eCLIP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 UNC45BQ8IWX7 931 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 PYROXD2Q8N2H3 581 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 ATP6V0D2Q8N8Y2 350 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 KCTD6Q8NC69 237 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 SH3RF2Q8TEC5 729 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 HNRNPLLQ8WVV9 542 aaKnown RBP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 USP13Q92995 863 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 WBP2Q969T9 261 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 RNF25Q96BH1 459 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 BTN2A3PQ96KV6 586 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 CALN1Q9BXU9 219 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 CARD9Q9H257 536 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 PCDH18Q9HCL0 1135 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 SCUBE2Q9NQ36 999 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 CFAP97Q9P2B7 532 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 SLC12A6Q9UHW9 1150 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 XPO7Q9UIA9 1087 aaKnown RBP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 LSM7Q9UK45 103 aaKnown RBP9.68□□□□□ -0.86
PHGDH-228ENST00000641847 CCL26Q9Y258 94 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 SH3BP1Q9Y3L3 701 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 PCDHB9Q9Y5E1 797 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 HS3ST4Q9Y661 456 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 SAR1BQ9Y6B6 198 aa9.68□□□□□ -0.86
PHGDH-228ENST00000641847 ACACAQ13085 2346 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 C3orf70A6NLC5 250 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-228ENST00000641847 PATE3B3GLJ2 98 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 H3BRJ5 948 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 CES2O00748 559 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 SCAMP3O14828 347 aaKnown RBP9.67□□□□□ -0.86
PHGDH-228ENST00000641847 ZNF185O15231 689 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 CEP104O60308 925 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 URI1O94763 535 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-228ENST00000641847 ALDH1A2O94788 518 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 ZRANB2O95218 330 aaKnown RBP eCLIP9.67□□□□□ -0.86
PHGDH-228ENST00000641847 PYGMP11217 842 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 KDELR1P24390 212 aa9.67□□□□□ -0.86
PHGDH-228ENST00000641847 WEE1P30291 646 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms