RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 IPO11Q9UI26 975 aaKnown RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF180Q9UJW8 692 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 STOML2Q9UJZ1 356 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 VANGL2Q9ULK5 521 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 NOVA2Q9UNW9 492 aaKnown RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 DENND4CQ5VZ89 1909 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 CHD5Q8TDI0 1954 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 PLXNA4Q9HCM2 1894 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 IQANK1A0A1B0GTG1 560 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 CXorf51AA0A1B0GTR3 108 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 A0A1B0GVM2 712 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 TCAF2A6NFQ2 919 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 GOLGA8MH3BSY2 632 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 DFFAO00273 331 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 COCHO43405 550 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MAFKO60675 156 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 SHOX2O60902 331 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MAP3K6O95382 1288 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 F11P03951 625 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 CNPP09543 421 aaKnown RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 HNRNPA1P09651 372 aaKnown RBP eCLIP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 LINC00271P0C7V0 271 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 CES1P23141 567 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 PSMB4P28070 264 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 ELK3P41970 407 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MSH2P43246 934 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 PGFP49763 221 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 SERPINB9P50453 376 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MAGOHP61326 146 aaKnown RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MPP3Q13368 585 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 LAMB3Q13751 1172 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 POLD3Q15054 466 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 FNBP1LQ5T0N5 605 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 ADGRF1Q5T601 910 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 RAP1GAP2Q684P5 730 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 FBXL22Q6P050 247 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 LEKR1Q6ZMV7 388 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 KIAA1958Q8N8K9 716 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MRPL43Q8N983 215 aaKnown RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 KREMEN2Q8NCW0 462 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 GSDMBQ8TAX9 411 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 DPF3Q92784 378 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MTBPQ96DY7 904 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 KLHL5Q96PQ7 755 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 TCF25Q9BQ70 676 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 CAPS2Q9BXY5 557 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MAGEB5Q9BZ81 275 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 SLC39A8Q9C0K1 460 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 IL22Q9GZX6 179 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 SP110Q9HB58 689 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 SSU72Q9NP77 194 aaKnown RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 DNAJC17Q9NVM6 304 aaKnown RBP9.94□□□□□ -0.82
PHGDH-215ENST00000641371 SAMD15Q9P1V8 674 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 PCDH10Q9P2E7 1040 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 NUDT5Q9UKK9 219 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 MFHAS1Q9Y4C4 1052 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 PCDHA11Q9Y5I1 949 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 BRCA2P51587 3418 aa9.94□□□□□ -0.82
PHGDH-215ENST00000641371 TRAV19A0A0A6YYK7 116 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 TCRBV7S3A2A0A539 114 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 ILVBLA1L0T0 632 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 RASA4BC9J798 803 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 KCNK1O00180 336 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 RASA4O43374 803 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 TGM5O43548 720 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 XYLBO75191 536 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 STC2O76061 302 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 TBX18O95935 607 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 JCHAINP01591 159 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 POLBP06746 335 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 C8AP07357 584 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 INHBAP08476 426 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 MBL2P11226 248 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-215ENST00000641371 PGAM1P18669 254 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 PRKCHP24723 683 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 OR1E1P30953 314 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 CA8P35219 290 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 PAPOLAP51003 745 aaKnown RBP9.93□□□□□ -0.82
PHGDH-215ENST00000641371 SLC7A9P82251 487 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 CDH17Q12864 832 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 DNAJC3Q13217 504 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 ARHGAP15Q53QZ3 475 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 SPANXN3Q5MJ09 141 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 PPM1LQ5SGD2 360 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 MARC1Q5VT66 337 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 STEAP4Q687X5 459 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 KCTD16Q68DU8 428 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 KCTD11Q693B1 232 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 ADGRD1Q6QNK2 874 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 C14orf80Q86SX3 495 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 METTL3Q86U44 580 aaKnown RBP9.93□□□□□ -0.82
PHGDH-215ENST00000641371 CAND1Q86VP6 1230 aaKnown RBP9.93□□□□□ -0.82
PHGDH-215ENST00000641371 LRRC6Q86X45 466 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 TEX26Q8N6G2 289 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 EPS8L3Q8TE67 593 aaKnown RBP9.93□□□□□ -0.82
PHGDH-215ENST00000641371 ARHGEF2Q92974 986 aaKnown RBP9.93□□□□□ -0.82
PHGDH-215ENST00000641371 TTC17Q96AE7 1141 aa9.93□□□□□ -0.82
PHGDH-215ENST00000641371 STAMBPL1Q96FJ0 436 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms