RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 SYNCQ9H7C4 482 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 SIX2Q9NPC8 291 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 SLC25A13Q9UJS0 675 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 GPSM3Q9Y4H4 160 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 SNX10Q9Y5X0 201 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 HS3ST4Q9Y661 456 aa17.2■□□□□ 0.34
PHGDH-213ENST00000641272 DSPP15924 2871 aaKnown RBP17.2■□□□□ 0.34
PHGDH-213ENST00000641272 GOLGA4Q13439 2230 aaKnown RBP17.2■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3DA0A087WVF3 549 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3IA0A087WXS9 549 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3EA0A087X179 549 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3KA0A087X1G2 549 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 A0A1W2PR77 199 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3FA6NER0 549 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3LB9A6J9 549 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3HP0C7X1 549 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TFE3P19532 575 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-213ENST00000641272 PON1P27169 355 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 CCR5P51681 352 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 DNAJC3Q13217 504 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 SLC12A1Q13621 1099 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 AUHQ13825 339 aaKnown RBP17.19■□□□□ 0.34
PHGDH-213ENST00000641272 COL9A2Q14055 689 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-213ENST00000641272 COL28A1Q2UY09 1125 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3GQ6DHY5 549 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3CQ6IPX1 549 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 C11orf57Q6ZUT1 292 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-213ENST00000641272 SLC47A2Q86VL8 602 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 IRF2BP1Q8IU81 584 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 TBC1D3Q8IZP1 549 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-213ENST00000641272 SPAG5Q96R06 1193 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 MYOCQ99972 504 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 SIK2Q9H0K1 926 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 GDF3Q9NR23 364 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 ASNSD1Q9NWL6 643 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 KIAA1468Q9P260 1216 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 VPS28Q9UK41 221 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 SARDHQ9UL12 918 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 PCDHGC3Q9UN70 934 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 CA5BQ9Y2D0 317 aa17.19■□□□□ 0.34
PHGDH-213ENST00000641272 M0QYT0 321 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 PAGE1O75459 146 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 ITGAVP06756 1048 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 SLC2A3P11169 496 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 EPHA8P29322 1005 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-213ENST00000641272 SULT2A1Q06520 285 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-213ENST00000641272 EFHC1Q5JVL4 640 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 EID2Q8N6I1 236 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 CNDP2Q96KP4 475 aaKnown RBP17.18■□□□□ 0.34
PHGDH-213ENST00000641272 NOX5Q96PH1 765 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 MUC3BQ9H195 1237 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 PIGVQ9NUD9 493 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 DNAJC12Q9UKB3 198 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 ACACAQ13085 2346 aa17.18■□□□□ 0.34
PHGDH-213ENST00000641272 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-213ENST00000641272 ENC1O14682 589 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 SNAP91O60641 907 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 CNTN5O94779 1100 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 GLI1P08151 1106 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 SULT1E1P49888 294 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 NXPH1P58417 271 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 RNASE9P60153 205 aaKnown RBP17.17■□□□□ 0.34
PHGDH-213ENST00000641272 PTK2Q05397 1052 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 CYP4F3Q08477 520 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 CNTN1Q12860 1018 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 ZNF177Q13360 481 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-213ENST00000641272 AGBL4Q5VU57 503 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 NAPEPLDQ6IQ20 393 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 SLC26A9Q7LBE3 791 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 GALNT15Q8N3T1 639 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 PIP4K2CQ8TBX8 421 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 HNRNPLLQ8WVV9 542 aaKnown RBP17.17■□□□□ 0.34
PHGDH-213ENST00000641272 SKA1Q96BD8 255 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 ALG14Q96F25 216 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 FAM81BQ96LP2 452 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 ANLNQ9NQW6 1124 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 TMPRSS4Q9NRS4 437 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 ITPR1Q14643 2758 aa17.17■□□□□ 0.34
PHGDH-213ENST00000641272 TRABD2BA6NFA1 517 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 C10orf142B7Z368 130 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 DFNA5O60443 496 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 SDC3O75056 442 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 ADCY5O95622 1261 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 RHOCP08134 193 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 ZNF18P17022 549 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 CLCN1P35523 988 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 KRT9P35527 623 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 SLC6A3Q01959 620 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 BNIP3Q12983 259 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 RAPGEF1Q13905 1077 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 DLG2Q15700 870 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 ALFQ53S48 1182 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 TAF3Q5VWG9 929 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 SPATS2Q86XZ4 545 aaKnown RBP17.16■□□□□ 0.34
PHGDH-213ENST00000641272 SAP25Q8TEE9 199 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 KLK6Q92876 244 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 FEM1AQ9BSK4 669 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 PDCL3Q9H2J4 239 aa17.16■□□□□ 0.34
PHGDH-213ENST00000641272 C1QTNF3-AMACRE9PGA6 284 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms