RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 LRRC40Q9H9A6 602 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 PLAC1Q9HBJ0 212 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 MRPL17Q9NRX2 175 aaKnown RBP17.67■□□□□ 0.42
PHGDH-208ENST00000641023 TRPM5Q9NZQ8 1165 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 BFARQ9NZS9 450 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 ZNF180Q9UJW8 692 aa17.67■□□□□ 0.42
PHGDH-208ENST00000641023 AAR2Q9Y312 384 aaKnown RBP17.67■□□□□ 0.42
PHGDH-208ENST00000641023 DRGXA6NNA5 263 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 NEBLO76041 1014 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 C1QAP02745 245 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 HMGA1P17096 107 aaKnown RBP17.66■□□□□ 0.42
PHGDH-208ENST00000641023 PGAM1P18669 254 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 KRT4P19013 534 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 MPP2Q14168 576 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 LRRC14Q15048 493 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 TFAP2DQ7Z6R9 452 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 C4orf33Q8N1A6 199 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 CNTD1Q8N815 330 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 OR52K1Q8NGK4 314 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 USP33Q8TEY7 942 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 ZNF473Q8WTR7 871 aaKnown RBP17.66■□□□□ 0.42
PHGDH-208ENST00000641023 RPRD1AQ96P16 312 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-208ENST00000641023 PPP1R2P1Q96PQ5 205 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 IL12RB2Q99665 862 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 FAM107BQ9H098 131 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 KIF9Q9HAQ2 790 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 SSU72Q9NP77 194 aaKnown RBP17.66■□□□□ 0.42
PHGDH-208ENST00000641023 IL23AQ9NPF7 189 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 SAMD15Q9P1V8 674 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 IPO11Q9UI26 975 aaKnown RBP17.66■□□□□ 0.42
PHGDH-208ENST00000641023 YIPF1Q9Y548 306 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 PCDHB12Q9Y5F1 795 aa17.66■□□□□ 0.42
PHGDH-208ENST00000641023 A0A1W2PPM1 405 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 CACNG3O60359 315 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 POLBP06746 335 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 IFNAR2P48551 515 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 CCT5P48643 541 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 HARS2P49590 506 aaKnown RBP17.65■□□□□ 0.42
PHGDH-208ENST00000641023 HNRNPH2P55795 449 aaKnown RBP17.65■□□□□ 0.42
PHGDH-208ENST00000641023 NAPEPLDQ6IQ20 393 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 CPLX4Q7Z7G2 160 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 LINC00523Q86TU6 105 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 CHSY1Q86X52 802 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 ARNTL2Q8WYA1 636 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 TTC17Q96AE7 1141 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 ALKBH8Q96BT7 664 aaKnown RBP17.65■□□□□ 0.42
PHGDH-208ENST00000641023 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.65■□□□□ 0.42
PHGDH-208ENST00000641023 PIH1D1Q9NWS0 290 aaKnown RBP17.65■□□□□ 0.42
PHGDH-208ENST00000641023 MOCS1Q9NZB8 636 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 EBAG9O00559 213 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 PRRG1O14668 218 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 SPAG7O75391 227 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 KRT37O76014 449 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 ALDH1A2O94788 518 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 DNAJB2P25686 324 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 PPP3CCP48454 512 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 LBX1P52954 281 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 CRADDP78560 199 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 ALFQ53S48 1182 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 TTC39BQ5VTQ0 682 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-208ENST00000641023 STEAP4Q687X5 459 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 GPR65Q8IYL9 337 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 MZB1Q8WU39 189 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 CDKL2Q92772 493 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 IGSF8Q969P0 613 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 TRMT2BQ96GJ1 504 aaKnown RBP17.65■□□□□ 0.42
PHGDH-208ENST00000641023 FCRL5Q96RD9 977 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 MLPHQ9BV36 600 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-208ENST00000641023 CASS4Q9NQ75 786 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 MAFFQ9ULX9 164 aa17.65■□□□□ 0.42
PHGDH-208ENST00000641023 FAM159BA6NKW6 160 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 USP12O75317 370 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 ANXA9O76027 345 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 CNTN5O94779 1100 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 MT-ND3P03897 115 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 CA4P22748 312 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 DNAJC5GQ8N7S2 189 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 ZNF317Q96PQ6 595 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-208ENST00000641023 TRIM56Q9BRZ2 755 aaKnown RBP17.64■□□□□ 0.41
PHGDH-208ENST00000641023 NOL6Q9H6R4 1146 aaKnown RBP17.64■□□□□ 0.41
PHGDH-208ENST00000641023 RBM22Q9NW64 420 aaKnown RBP eCLIP17.64■□□□□ 0.41
PHGDH-208ENST00000641023 SYBUQ9NX95 663 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 SHROOM3Q8TF72 1996 aa17.64■□□□□ 0.41
PHGDH-208ENST00000641023 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-208ENST00000641023 MAGEB16A2A368 324 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 ZBBXA8MT70 800 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 F5H5T6 163 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 NPY2RP49146 381 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 SLC11A2P49281 568 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 KCNQ1P51787 676 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 CREMQ03060 361 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 HNRNPDQ14103 355 aaKnown RBP17.63■□□□□ 0.41
PHGDH-208ENST00000641023 TRMT10BQ6PF06 316 aaKnown RBP17.63■□□□□ 0.41
PHGDH-208ENST00000641023 FOXR1Q6PIV2 292 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 OTOP3Q7RTS5 596 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 TCEAL8Q8IYN2 117 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 FATE1Q969F0 183 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 GLOD4Q9HC38 313 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 MLXIPLQ9NP71 852 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 UXTQ9UBK9 157 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms