RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ASB3Q9Y575 518 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 MYOCOSA0A1B0GUC4 107 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 A0A1B0GVG6 124 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 ALDH1A2O94788 518 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 ATP6V1B1P15313 513 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 PTPN3P26045 913 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 SERPINB8P50452 374 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 CTBP1Q13363 440 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 CMPK2Q5EBM0 449 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 TAPT1Q6NXT6 567 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 NOTUMQ6P988 496 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 PIP4K2CQ8TBX8 421 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 ACMSDQ8TDX5 336 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 SREK1Q8WXA9 508 aaKnown RBP14.9□□□□□ -0.02
SCARB2-221ENST00000640341 CPNE1Q99829 537 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.9□□□□□ -0.02
SCARB2-221ENST00000640341 CDY2AQ9Y6F7 541 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 CDY1Q9Y6F8 540 aa14.9□□□□□ -0.02
SCARB2-221ENST00000640341 YJEFN3A6XGL0 299 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 TMEM233B4DJY2 109 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 TRIM13O60858 407 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 PIGNO95427 931 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 NMBRP28336 390 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 RBBP5Q15291 538 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 ANKRD20A4Q4UJ75 823 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 FSCBQ5H9T9 825 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 OTOP3Q7RTS5 596 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 OSTM1Q86WC4 334 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 ANKRD13AQ8IZ07 590 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 NPWQ8N729 165 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 SPATA22Q8NHS9 363 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 KCTD4Q8WVF5 259 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 CENPIQ92674 756 aaPredicted RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 CDCA5Q96FF9 252 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 VPS39Q96JC1 886 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 RBBP8Q99708 897 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 RHOBTB2Q9BYZ6 727 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 CDH19Q9H159 772 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 PDP2Q9P2J9 529 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 UBQLN1Q9UMX0 589 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 USP3Q9Y6I4 520 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 DFFAO00273 331 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 CYP2C9P11712 490 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 CRABP2P29373 138 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 TAF6P49848 677 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 GRM3Q14832 879 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 STRADAQ7RTN6 431 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 ST13P4Q8IZP2 240 aaPredicted RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 ICA1LQ8NDH6 482 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 TMEM40Q8WWA1 233 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 NMD3Q96D46 503 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 C1orf21Q9H246 121 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 RUVBL2Q9Y230 463 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 BUD23O43709 281 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 TRPA1O75762 1119 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 JUNP05412 331 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 ARSAP15289 507 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 GRIA4P48058 902 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 POU5F1BQ06416 359 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 ZBTB17Q13105 803 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 ITGA7Q13683 1181 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 KYAT1Q16773 422 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 GRTP1Q5TC63 336 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 TMCO4Q5TGY1 634 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 STEAP4Q687X5 459 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 TWF2Q6IBS0 349 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 RPS27LQ71UM5 84 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 UNC93AQ86WB7 457 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 PSTKQ8IV42 348 aaKnown RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 FBXW8Q8N3Y1 598 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 TNIP3Q96KP6 325 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 ILKAPQ9H0C8 392 aaPredicted RBP14.89□□□□□ -0.03
SCARB2-221ENST00000640341 APPL1Q9UKG1 709 aa14.89□□□□□ -0.03
SCARB2-221ENST00000640341 HACD1B0YJ81 288 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 OR6B1O95007 311 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 MT-CYBP00156 380 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-221ENST00000640341 MLNP12872 115 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 VCLP18206 1134 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 ACADSBP45954 432 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 DCAF4L1Q3SXM0 396 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 ARL13AQ5H913 290 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-221ENST00000640341 GPC2Q8N158 579 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 IPMKQ8NFU5 416 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 PPTC7Q8NI37 304 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 ZSCAN18Q8TBC5 510 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-221ENST00000640341 RCN3Q96D15 328 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 ACE2Q9BYF1 805 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-221ENST00000640341 COPS7BQ9H9Q2 264 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-221ENST00000640341 CYP4F12Q9HCS2 524 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 CLIC5Q9NZA1 410 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 ARHGAP17Q68EM7 881 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 SLC41A1Q8IVJ1 513 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 DENND6AQ8IWF6 608 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 CNBD2Q96M20 576 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 C11orf84Q9BUA3 381 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-221ENST00000640341 MROH8Q9H579 483 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 PPP2R3BQ9Y5P8 575 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 ANK1P16157 1881 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 PLK1P53350 603 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 LIMK2P53671 638 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms