RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ANAPC7Q9UJX3 599 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 VPS28Q9UK41 221 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 DNAH14Q0VDD8 3507 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 CREB3O43889 395 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 SYNCRIPO60506 623 aaKnown RBP22.35■■□□□ 1.17
SCN1B-206ENST00000638536 MT-CO1P00395 513 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 IL1R2P27930 398 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 HOXD11P31277 338 aaPredicted RBP22.35■■□□□ 1.17
SCN1B-206ENST00000638536 L1CAMP32004 1257 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 USP39Q53GS9 565 aaKnown RBP22.35■■□□□ 1.17
SCN1B-206ENST00000638536 SETD3Q86TU7 594 aaPredicted RBP22.35■■□□□ 1.17
SCN1B-206ENST00000638536 DUSP15Q9H1R2 295 aaPredicted RBP22.35■■□□□ 1.17
SCN1B-206ENST00000638536 RNF8O76064 485 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 SRPRAP08240 638 aaKnown RBP22.35■■□□□ 1.17
SCN1B-206ENST00000638536 PLK5Q496M5 336 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 TXNRD3NBQ6F5E7 133 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 KIAA1324Q6UXG2 1013 aaKnown RBP22.35■■□□□ 1.17
SCN1B-206ENST00000638536 TBC1D31Q96DN5 1066 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 PRDM16Q9HAZ2 1276 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 OSGEPQ9NPF4 335 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 TMEM248Q9NWD8 314 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 AP4E1Q9UPM8 1137 aa22.35■■□□□ 1.17
SCN1B-206ENST00000638536 SIN3BO75182 1162 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 RHOQP17081 205 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 PI4KAP42356 2102 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 OXCT1P55809 520 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 ST8SIA6P61647 398 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 HNRNPA1L2Q32P51 320 aaKnown RBP22.34■■□□□ 1.17
SCN1B-206ENST00000638536 KCNT1Q5JUK3 1230 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 ERMARDQ5T6L9 678 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 ZNF564Q8TBZ8 553 aaPredicted RBP22.34■■□□□ 1.17
SCN1B-206ENST00000638536 PTPRN2Q92932 1015 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 KCTD15Q96SI1 283 aaPredicted RBP22.34■■□□□ 1.17
SCN1B-206ENST00000638536 DHX35Q9H5Z1 703 aaKnown RBP22.34■■□□□ 1.17
SCN1B-206ENST00000638536 VPS51Q9UID3 782 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 USP18Q9UMW8 372 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 CYP8B1Q9UNU6 501 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 ACTL7AQ9Y615 435 aa22.34■■□□□ 1.17
SCN1B-206ENST00000638536 ILVBLA1L0T0 632 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 H2AFZP0C0S5 128 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 EPHB2P29323 1055 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 ACVRL1P37023 503 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 AIF1P55008 147 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 C6orf118Q5T5N4 469 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 C9orf64Q5T6V5 341 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 LINGO4Q6UY18 593 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 H2AFVQ71UI9 128 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 OR2T3Q8NH03 318 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 FRS2Q8WU20 508 aa22.33■■□□□ 1.17
SCN1B-206ENST00000638536 NOL6Q9H6R4 1146 aaKnown RBP22.33■■□□□ 1.17
SCN1B-206ENST00000638536 K7ERQ8 282 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 DESP17661 470 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 GNA12Q03113 381 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 SULT2A1Q06520 285 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 E2F5Q15329 346 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 SMTNL2Q2TAL5 461 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 KDM1BQ8NB78 822 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 CTNNBL1Q8WYA6 563 aaPredicted RBP22.32■■□□□ 1.16
SCN1B-206ENST00000638536 ZC3H10Q96K80 434 aaKnown RBP22.32■■□□□ 1.16
SCN1B-206ENST00000638536 SPON2Q9BUD6 331 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 CTTNBP2NLQ9P2B4 639 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 SUN2Q9UH99 717 aa22.32■■□□□ 1.16
SCN1B-206ENST00000638536 TNRC6BQ9UPQ9 1833 aaKnown RBP22.32■■□□□ 1.16
SCN1B-206ENST00000638536 IGHV1OR15-9A0A0B4J2B8 117 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 SMAD6O43541 496 aaKnown RBP22.31■■□□□ 1.16
SCN1B-206ENST00000638536 PRPSAP2O60256 369 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 ZMPSTE24O75844 475 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 PCK1P35558 622 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 PIGHQ14442 188 aaPredicted RBP22.31■■□□□ 1.16
SCN1B-206ENST00000638536 NIPA2Q8N8Q9 360 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 SIPA1Q96FS4 1042 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 IP6K2Q9UHH9 426 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 CEP250Q9BV73 2442 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 DCHS1Q96JQ0 3298 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 SPTBN4Q9H254 2564 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 TMEM253P0C7T8 217 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 SRCP12931 536 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 RPS14P62263 151 aaKnown RBP22.31■■□□□ 1.16
SCN1B-206ENST00000638536 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.31■■□□□ 1.16
SCN1B-206ENST00000638536 SH2D3CQ8N5H7 860 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 DEFB119Q8N690 84 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 RTL3Q8N8U3 475 aaKnown RBP22.31■■□□□ 1.16
SCN1B-206ENST00000638536 DCAF4L2Q8NA75 395 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 ARHGEF2Q92974 986 aaKnown RBP22.31■■□□□ 1.16
SCN1B-206ENST00000638536 PPP1R9BQ96SB3 815 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 FAM129BQ96TA1 746 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 ZWILCHQ9H900 591 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 RAB23Q9ULC3 237 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 TFR2Q9UP52 801 aa22.31■■□□□ 1.16
SCN1B-206ENST00000638536 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 MYO1FO00160 1098 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 CBX4O00257 560 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 CD160O95971 181 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 GOT1P17174 413 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 MAPKAPK2P49137 400 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 ARF5P84085 180 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 SLC25A11Q02978 314 aaKnown RBP22.3■■□□□ 1.16
SCN1B-206ENST00000638536 ACAP1Q15027 740 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 DLG2Q15700 870 aa22.3■■□□□ 1.16
SCN1B-206ENST00000638536 PMS2CLQ68D20 193 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms