RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 A0A0D9SEW6 157 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 A0A1B0GTW7 788 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 BCAT2O15382 392 aaPredicted RBP18.21■□□□□ 0.51
PNKP-230ENST00000638016 SRGAP2O75044 1071 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 CLDN11O75508 207 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 TOP3BO95985 862 aaKnown RBP18.21■□□□□ 0.51
PNKP-230ENST00000638016 MT-CO1P00395 513 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 F9P00740 461 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 RHOCP08134 193 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 GNSP15586 552 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 GLDCP23378 1020 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 CDH4P55283 916 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 ZBTB16Q05516 673 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 ZNF252P-AS1Q0IIN9 211 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 SLC12A1Q13621 1099 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 POM121L1PQ3SYA9 428 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 Q6ZVU0 165 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 RABEPKQ7Z6M1 372 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 DNAAF5Q86Y56 855 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 OR7D4Q8NG98 312 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 CAMK1GQ96NX5 476 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 ORAI3Q9BRQ5 295 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 MUC3BQ9H195 1237 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 SUSD2Q9UGT4 822 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 TBC1D30Q9Y2I9 924 aa18.21■□□□□ 0.51
PNKP-230ENST00000638016 CABIN1Q9Y6J0 2220 aa18.21■□□□□ 0.5
PNKP-230ENST00000638016 TP53BP1Q12888 1972 aaPredicted RBP18.21■□□□□ 0.5
PNKP-230ENST00000638016 MAP1BP46821 2468 aaKnown RBP18.2■□□□□ 0.5
PNKP-230ENST00000638016 A0A1B0GVT2 93 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 TARSL2A2RTX5 802 aaKnown RBP18.2■□□□□ 0.5
PNKP-230ENST00000638016 C2CD4BA6NLJ0 364 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 DRGXA6NNA5 263 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 K7ERQ8 282 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 RNF103O00237 685 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 BNIP3LO60238 219 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 GJB3O75712 270 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 RNASEH2AO75792 299 aaKnown RBP18.2■□□□□ 0.5
PNKP-230ENST00000638016 IGHV4-34P06331 123 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 CD59P13987 128 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 PMLP29590 882 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 SLC8A1P32418 973 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 CSNK1EP49674 416 aaKnown RBP18.2■□□□□ 0.5
PNKP-230ENST00000638016 FAM193AP78312 1265 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 SEMA3BQ13214 749 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 ACCSLQ4AC99 568 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 E4F1Q66K89 784 aaPredicted RBP18.2■□□□□ 0.5
PNKP-230ENST00000638016 NCEH1Q6PIU2 408 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 LINGO4Q6UY18 593 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 TRIM72Q6ZMU5 477 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 BAP1Q92560 729 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 AGPAT1Q99943 283 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 EBF2Q9HAK2 575 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
PNKP-230ENST00000638016 TAS2R14Q9NYV8 317 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 ADAM22Q9P0K1 906 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 ZNF212Q9UDV6 495 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 VPS51Q9UID3 782 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 SARDHQ9UL12 918 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 ACTL7AQ9Y615 435 aa18.2■□□□□ 0.5
PNKP-230ENST00000638016 IGLV3-10A0A075B6K4 115 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 SPAARA0A1B0GVQ0 90 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 FAM72CH0Y354 149 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 OPHN1O60890 802 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 RNASEH1O60930 286 aaKnown RBP18.19■□□□□ 0.5
PNKP-230ENST00000638016 ENDOD1O94919 500 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 IL1BP01584 269 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 SPINK2P20155 84 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 CSRP1P21291 193 aaKnown RBP18.19■□□□□ 0.5
PNKP-230ENST00000638016 RFC1P35251 1148 aaPredicted RBP18.19■□□□□ 0.5
PNKP-230ENST00000638016 DRD3P35462 400 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 NSFP46459 744 aaKnown RBP18.19■□□□□ 0.5
PNKP-230ENST00000638016 GALCP54803 685 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 HDAC4P56524 1084 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 SULT2A1Q06520 285 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 DLG2Q15700 870 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 KCNT1Q5JUK3 1230 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 FAM72AQ5TYM5 149 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 FAM72DQ6L9T8 149 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 MON1BQ7L1V2 547 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 ARCQ7LC44 396 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 PIP4P1Q86T03 277 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 FAM72BQ86X60 149 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 PHF13Q86YI8 300 aaPredicted RBP18.19■□□□□ 0.5
PNKP-230ENST00000638016 HDDC3Q8N4P3 179 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 CCDC185Q8N715 623 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 NAP1L5Q96NT1 182 aaPredicted RBP18.19■□□□□ 0.5
PNKP-230ENST00000638016 BPIFA3Q9BQP9 254 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 SGK2Q9HBY8 427 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 NDFIP2Q9NV92 336 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 SLC25A13Q9UJS0 675 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 DAAM1Q9Y4D1 1078 aa18.19■□□□□ 0.5
PNKP-230ENST00000638016 TCRBV5S1A1TA0A578 114 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 SYCE3A1L190 88 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 SMAD6O43541 496 aaKnown RBP18.18■□□□□ 0.5
PNKP-230ENST00000638016 ATP9BO43861 1147 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 SYPP08247 313 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 SRCP12931 536 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 RRM1P23921 792 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 SDC4P31431 198 aa18.18■□□□□ 0.5
PNKP-230ENST00000638016 NNMTP40261 264 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms