RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 PCSK7Q16549 785 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 TRIM68Q6AZZ1 485 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 OVOS1Q6IE37 1185 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 DENND6AQ8IWF6 608 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 ZSCAN18Q8TBC5 510 aaPredicted RBP19.28■□□□□ 0.68
CLN5-216ENST00000636780 CDKL2Q92772 493 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 BTBD10Q9BSF8 475 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 BRD8Q9H0E9 1235 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 RCOR3Q9P2K3 495 aaPredicted RBP19.28■□□□□ 0.68
CLN5-216ENST00000636780 CCL22O00626 93 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 GJB3O75712 270 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 PBX3P40426 434 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 CXCR3P49682 368 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 MGAT3Q09327 533 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 IGSF9Q9P2J2 1179 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 DNAJB4Q9UDY4 337 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 PACSIN3Q9UKS6 424 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 SLC39A10Q9ULF5 831 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 C15orf41Q9Y2V0 281 aa19.28■□□□□ 0.68
CLN5-216ENST00000636780 SNNO75324 88 aaPredicted RBP19.27■□□□□ 0.68
CLN5-216ENST00000636780 PAGE1O75459 146 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 MYCP01106 439 aaPredicted RBP19.27■□□□□ 0.68
CLN5-216ENST00000636780 CCND1P24385 295 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 SLC5A3P53794 718 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 MAXP61244 160 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 SLC39A12Q504Y0 691 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 INTS6LQ5JSJ4 861 aaKnown RBP19.27■□□□□ 0.68
CLN5-216ENST00000636780 RGMBQ6NW40 437 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 RTN4RL1Q86UN2 441 aaPredicted RBP19.27■□□□□ 0.68
CLN5-216ENST00000636780 RBM15BQ8NDT2 890 aaKnown RBP19.27■□□□□ 0.68
CLN5-216ENST00000636780 MTBPQ96DY7 904 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 EBF2Q9HAK2 575 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 NOD1Q9Y239 953 aa19.27■□□□□ 0.68
CLN5-216ENST00000636780 CDH23Q9H251 3354 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 LOC100653049A0A140TA62 436 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 UNCXA6NJT0 531 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 KRT34O76011 436 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 ARL13BQ3SXY8 428 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 ACSBG2Q5FVE4 666 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 ATG16L1Q676U5 607 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.27■□□□□ 0.67
CLN5-216ENST00000636780 RSPH1Q8WYR4 309 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 INPP5DQ92835 1189 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 SLC39A8Q9C0K1 460 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 TRPV6Q9H1D0 765 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 BFARQ9NZS9 450 aa19.27■□□□□ 0.67
CLN5-216ENST00000636780 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.26■□□□□ 0.67
CLN5-216ENST00000636780 AURKAO14965 403 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 HMBSP08397 361 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 MLNP12872 115 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 KCTD11Q693B1 232 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 C4orf50Q6ZRC1 276 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 SCD5Q86SK9 330 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 FCRL2Q96LA5 508 aaPredicted RBP19.26■□□□□ 0.67
CLN5-216ENST00000636780 ZFYVE28Q9HCC9 887 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 MTF2Q9Y483 593 aaPredicted RBP19.26■□□□□ 0.67
CLN5-216ENST00000636780 TSC2P49815 1807 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 A0A1W2PQH9 124 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 MANSC4A6NHS7 340 aaPredicted RBP19.26■□□□□ 0.67
CLN5-216ENST00000636780 GPR182O15218 404 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 FBXO21O94952 628 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 TGDSO95455 350 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 TPBGLP0DKB5 382 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 ODC1P11926 461 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 PCSK1P29120 753 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 SERPINB9P50453 376 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 USP46P62068 366 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 MPP1Q00013 466 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 C4orf22Q6V702 233 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 TMEM86AQ8N2M4 240 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 MCUR1Q96AQ8 359 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 SORT1Q99523 831 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 EPAS1Q99814 870 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 DNAI2Q9GZS0 605 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 NOP53Q9NZM5 478 aaKnown RBP19.26■□□□□ 0.67
CLN5-216ENST00000636780 GIT1Q9Y2X7 761 aa19.26■□□□□ 0.67
CLN5-216ENST00000636780 GOLGA8QA0A0J9YX86 632 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 GOLGA8OA6NCC3 632 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 GOLGA8NF8WBI6 632 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 TK2O00142 265 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 CCDC22O60826 627 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 ATP5HO75947 161 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 IGHA2P01877 340 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 PROCP04070 461 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 GABRB3P28472 473 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 GRM3Q14832 879 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 ESRP1Q6NXG1 681 aaKnown RBP19.25■□□□□ 0.67
CLN5-216ENST00000636780 FAM171BQ6P995 826 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 EP400NLQ6ZTU2 488 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 KCNMB4Q86W47 210 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 CIR1Q86X95 450 aaPredicted RBP19.25■□□□□ 0.67
CLN5-216ENST00000636780 MAGEC3Q8TD91 643 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 TEKT5Q96M29 485 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 C7orf26Q96N11 449 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 KLHL5Q96PQ7 755 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 GBA3Q9H227 469 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 A0A096LPK6 155 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 GP5P40197 560 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 GATMP50440 423 aa19.25■□□□□ 0.67
CLN5-216ENST00000636780 SLC25A3Q00325 362 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms