RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PEX19P40855 299 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 ARL4CP56559 192 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 MAP3K7CLP57077 242 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 RPL10AP62906 217 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 PDIA2Q13087 525 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 GOLGA7BQ2TAP0 167 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 TFDP3Q5H9I0 405 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 AP1ARQ63HQ0 302 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 TTC30AQ86WT1 665 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 CHSY1Q86X52 802 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 TTC13Q8NBP0 860 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 PPFIBP2Q8ND30 876 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 ITFG1Q8TB96 612 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 TCEAL4Q96EI5 215 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 NECTIN4Q96NY8 510 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 LRRC3Q9BY71 257 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 YIPF3Q9GZM5 350 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 ACSS3Q9H6R3 686 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 MANSC1Q9H8J5 431 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 ZNF212Q9UDV6 495 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 TSPAN16Q9UKR8 245 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 ANAPC1Q9H1A4 1944 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 SLC38A8A6NNN8 435 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 GSC2O15499 205 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 ENTPD5O75356 428 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 CALB1P05937 261 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 FAM200BP0CF97 657 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 MYL4P12829 197 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 HMGA1P17096 107 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 CDC25CP30307 473 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 USP46P62068 366 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 ROR2Q01974 943 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 SLC34A1Q06495 639 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 IFRD2Q12894 506 aaPredicted RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 PUS10Q3MIT2 529 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 ARHGAP17Q68EM7 881 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 PRUNE1Q86TP1 453 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 PPIL6Q8IXY8 311 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 ING5Q8WYH8 240 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 PTCD3Q96EY7 689 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 TRAPPC9Q96Q05 1148 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 C11orf70Q9BRQ4 267 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 MAK16Q9BXY0 300 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 CADM1Q9BY67 442 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 NPHS2Q9NP85 383 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 DMAP1Q9NPF5 467 aaPredicted RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 ASAH2Q9NR71 780 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 STX18Q9P2W9 335 aaKnown RBP15.89■□□□□ 0.13
CLN8-209ENST00000635970 SCOCQ9UIL1 159 aa15.89■□□□□ 0.13
CLN8-209ENST00000635970 E7ESA3 106 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 GYG2O15488 501 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 SMIM24O75264 130 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 ATP5BP06576 529 aaKnown RBP15.88■□□□□ 0.13
CLN8-209ENST00000635970 VDRP11473 427 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 SSR1P43307 286 aaKnown RBP15.88■□□□□ 0.13
CLN8-209ENST00000635970 PAPOLAP51003 745 aaKnown RBP15.88■□□□□ 0.13
CLN8-209ENST00000635970 PIGHQ14442 188 aaPredicted RBP15.88■□□□□ 0.13
CLN8-209ENST00000635970 GSTA3Q16772 222 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 PRSS36Q5K4E3 855 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 PDZD4Q76G19 769 aaPredicted RBP15.88■□□□□ 0.13
CLN8-209ENST00000635970 ITIH5Q86UX2 942 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 ZNF276Q8N554 614 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 BANPQ8N9N5 519 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 SPDYE1Q8NFV5 336 aaPredicted RBP15.88■□□□□ 0.13
CLN8-209ENST00000635970 PYROXD1Q8WU10 500 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 C8orf48Q96LL4 319 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 CCDC28BQ9BUN5 200 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 DNAI2Q9GZS0 605 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 CSNK1G1Q9HCP0 422 aa15.88■□□□□ 0.13
CLN8-209ENST00000635970 PAPOLBQ9NRJ5 636 aaKnown RBP15.88■□□□□ 0.13
CLN8-209ENST00000635970 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLN8-209ENST00000635970 FARP1Q9Y4F1 1045 aaPredicted RBP15.88■□□□□ 0.13
CLN8-209ENST00000635970 A0A1W2PPM1 405 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 TMEM191CA6NGB0 347 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 SIGLEC16A6NMB1 481 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 KRT1P04264 644 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 NPR3P17342 541 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 FSHRP23945 695 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 GNA15P30679 374 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 ARFIP2P53365 341 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 TAF12Q16514 161 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 KHDC1Q4VXA5 237 aaKnown RBP15.87■□□□□ 0.13
CLN8-209ENST00000635970 SNX30Q5VWJ9 437 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 TMEM154Q6P9G4 183 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 POTEHQ6S545 545 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 SPOCD1Q6ZMY3 1216 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 DENND5BQ6ZUT9 1274 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 GPRIN1Q7Z2K8 1008 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLN8-209ENST00000635970 TTC8Q8TAM2 541 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 MCUR1Q96AQ8 359 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 SPATA17Q96L03 361 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 PHF7Q9BWX1 381 aaPredicted RBP15.87■□□□□ 0.13
CLN8-209ENST00000635970 NMRK1Q9NWW6 199 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLN8-209ENST00000635970 FAM50BQ9Y247 325 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 USTQ9Y2C2 406 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 hCG_1818297A0A087WSY0 165 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 IQANK1A0A1B0GTG1 560 aa15.87■□□□□ 0.13
CLN8-209ENST00000635970 A0A1W2PRU2 124 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms