RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SPA17Q15506 151 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 FNDC3BQ53EP0 1204 aaKnown RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 KCNT1Q5JUK3 1230 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 TXNRD3NBQ6F5E7 133 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ZC3H14Q6PJT7 736 aaKnown RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 CPNE8Q86YQ8 564 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 RTL3Q8N8U3 475 aaKnown RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 MDGA1Q8NFP4 955 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 TEKT4Q8WW24 435 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 HMGB4Q8WW32 186 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ZNF830Q96NB3 372 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 KCTD15Q96SI1 283 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 PSMB7Q99436 277 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 PHOX2BQ99453 314 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 EPAS1Q99814 870 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 MUC3BQ9H195 1237 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 EML5Q05BV3 1969 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 CHD5Q8TDI0 1954 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 TTC34A8MYJ7 566 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 GOLGA6L6A8MZA4 724 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 EEF2KO00418 725 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 FGF10O15520 208 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 SYNCRIPO60506 623 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 SNAP91O60641 907 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 ZMPSTE24O75844 475 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 EPHX1P07099 455 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 C7P10643 843 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 GOT1P17174 413 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 MAN1A1P33908 653 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 CNR2P34972 360 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 STK19P49842 368 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 ZNF135P52742 658 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 HADHBP55084 474 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 TPI1P60174 286 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 ST8SIA6P61647 398 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 MESDQ14696 234 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 STARD3Q14849 445 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 DPYSL2Q16555 572 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 SMTNL2Q2TAL5 461 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 HNRNPA1L2Q32P51 320 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 RFX8Q6ZV50 586 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 ZNF366Q8N895 744 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 OR7D4Q8NG98 312 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 ARHGEF2Q92974 986 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 ERLEC1Q96DZ1 483 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 RPL10LQ96L21 214 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 MRGPRX1Q96LB2 322 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 C2orf49Q9BVC5 232 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 ACE2Q9BYF1 805 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 MKRN2Q9H000 416 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 SEMA4AQ9H3S1 761 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 NOL6Q9H6R4 1146 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 CATSPERBQ9H7T0 1116 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 ZWILCHQ9H900 591 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 PRSS16Q9NQE7 514 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 CWC15Q9P013 229 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 SUN2Q9UH99 717 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 DNAI1Q9UI46 699 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 VPS51Q9UID3 782 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 TFR2Q9UP52 801 aa9.98□□□□□ -0.81
LINC00339-210ENST00000635675 REXO2Q9Y3B8 237 aaKnown RBP9.98□□□□□ -0.81
LINC00339-210ENST00000635675 RCCD1A6NED2 376 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 ATP9BO43861 1147 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 MT-CO1P00395 513 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 NDUFV2P19404 249 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 ACVRL1P37023 503 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 NNMTP40261 264 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 ARSEP51690 589 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 COPAP53621 1224 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 GSDMDP57764 484 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 TAS2R40P59535 323 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 KRT83P78385 493 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 SRSF5Q13243 272 aaKnown RBP9.97□□□□□ -0.81
LINC00339-210ENST00000635675 HADHQ16836 314 aaKnown RBP9.97□□□□□ -0.81
LINC00339-210ENST00000635675 ATP13A4Q4VNC1 1196 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 PPP6R3Q5H9R7 873 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-210ENST00000635675 POLNQ7Z5Q5 900 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 UMODL1-AS1Q8N2C9 162 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 DCAF4L2Q8NA75 395 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 OR2T3Q8NH03 318 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 FAM71BQ8TC56 605 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 FRS2Q8WU20 508 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 GAB3Q8WWW8 586 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 HSPH1Q92598 858 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 SPON2Q9BUD6 331 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 TPSD1Q9BZJ3 242 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 KLC2Q9H0B6 622 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 SLC6A17Q9H1V8 727 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 MAGEH1Q9H213 219 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 EPC1Q9H2F5 836 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 MTG2Q9H4K7 406 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 LUC7LQ9NQ29 371 aaKnown RBP9.97□□□□□ -0.81
LINC00339-210ENST00000635675 BCCIPQ9P287 314 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC00339-210ENST00000635675 HS3ST2Q9Y278 367 aa9.97□□□□□ -0.81
LINC00339-210ENST00000635675 NUP205Q92621 2012 aa9.96□□□□□ -0.81
LINC00339-210ENST00000635675 A0A0A6YYK5 440 aaPredicted RBP9.96□□□□□ -0.82
LINC00339-210ENST00000635675 EDDM13A0A1B0GTR0 161 aa9.96□□□□□ -0.82
LINC00339-210ENST00000635675 CXorf51AA0A1B0GTR3 108 aa9.96□□□□□ -0.82
LINC00339-210ENST00000635675 TARSL2A2RTX5 802 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms