RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ANGPT4Q9Y264 503 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 CDK7P50613 346 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 EFEMP1Q12805 493 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 OR7A2PQ8NGA2 310 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 FRMD6Q96NE9 622 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 CHCHD6Q9BRQ6 235 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 RPS6KA3P51812 740 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 CDH17Q12864 832 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 KLHDC7AQ5VTJ3 777 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 SHC4Q6S5L8 630 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 KYAT3Q6YP21 454 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 MARK2Q7KZI7 788 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 GJD3Q8N144 294 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 SPPL2AQ8TCT8 520 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 SLC25A23Q9BV35 468 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 NECTIN3Q9NQS3 549 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 C8orf4Q9NR00 106 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 MARK1Q9P0L2 795 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 KANSL3Q9P2N6 904 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 DNPEPQ9ULA0 475 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 NCKAP1Q9Y2A7 1128 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 MSCO60682 206 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 IGSF6O95976 241 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZMYND11Q15326 602 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 EIF3MQ7L2H7 374 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 TRIM2Q9C040 744 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 GNPTGQ9UJJ9 305 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 CCR1P32246 355 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 FAM83AQ86UY5 434 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ALG6Q9Y672 507 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZCCHC18P0CG32 403 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF7P17097 686 aaPredicted RBP13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 BST2Q10589 180 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 PKN1Q16512 942 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 CYP3A43Q9HB55 503 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 HAO1Q9UJM8 370 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 KNTC1P50748 2209 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 USP27XA6NNY8 438 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ERI2A8K979 691 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 CXCL11O14625 94 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 TYMPP19971 482 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 QPRTQ15274 297 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF549Q6P9A3 640 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZDHHC17Q8IUH5 632 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 FAM20CQ8IXL6 584 aa13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 C8orf59Q8N0T1 100 aaPredicted RBP13.4□□□□□ -0.26
SYNGAP1-208ENST00000629380 CLOCKO15516 846 aa13.4□□□□□ -0.27
SYNGAP1-208ENST00000629380 CHRNGP07510 517 aa13.4□□□□□ -0.27
SYNGAP1-208ENST00000629380 IRAK1P51617 712 aa13.4□□□□□ -0.27
SYNGAP1-208ENST00000629380 USP45Q70EL2 814 aa13.4□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.27
SYNGAP1-208ENST00000629380 SLC9A8Q9Y2E8 581 aa13.4□□□□□ -0.27
SYNGAP1-208ENST00000629380 LTN1O94822 1766 aa13.4□□□□□ -0.27
SYNGAP1-208ENST00000629380 CBX4O00257 560 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 RBMXL2O75526 392 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 ICAM1P05362 532 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 NAMPTP43490 491 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 BACE1P56817 501 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 FCHO2Q0JRZ9 810 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 CBWD3Q5JTY5 395 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 CBWD5Q5RIA9 395 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 PYHIN1Q6K0P9 492 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 SAMD7Q7Z3H4 446 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 OXNAD1Q96HP4 312 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 MFHAS1Q9Y4C4 1052 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 TAF6LQ9Y6J9 622 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 CYB561D2O14569 222 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 RAG1P15918 1043 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 SLC26A2P50443 739 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 CTXN3Q4LDR2 81 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 SLC45A4Q5BKX6 768 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZIM3Q96PE6 472 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 ADAM33Q9BZ11 813 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 LARGE1O95461 756 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 MYBP10242 640 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 CYP11B1P15538 503 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 KCNMB4Q86W47 210 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 FAM129BQ96TA1 746 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 TBCBQ99426 244 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 C1QTNF1Q9BXJ1 281 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 FBXL21Q9UKT6 434 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 PCM1Q15154 2024 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 CYP1A1P04798 512 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 CPA3P15088 417 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 RBBP4Q09028 425 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 ARHGEF19Q8IW93 802 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 ZNF248Q8NDW4 579 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 MYCBPAPQ8TBZ2 947 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 ERGIC2Q96RQ1 377 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 FAIM2Q9BWQ8 316 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 EXO5Q9H790 373 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 LIMD1Q9UGP4 676 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 ERGIC3Q9Y282 383 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 CDC40O60508 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 KCNMA1Q12791 1236 aa13.39□□□□□ -0.27
SYNGAP1-208ENST00000629380 RGS21Q2M5E4 152 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms