RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
VPS8-227ENST00000625842 ANKRD49Q8WVL7 239 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 DEPDC7Q96QD5 511 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 AURKCQ9UQB9 309 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 UBIAD1Q9Y5Z9 338 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 USP32Q8NFA0 1604 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 FAM220BPB1ANY3 271 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 GLRA3O75311 464 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 CSDE1O75534 798 aaKnown RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 PSMA4P25789 261 aaKnown RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 TTPAP49638 278 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 PRKAA2P54646 552 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 CAPRIN2Q6IMN6 1127 aaKnown RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 KIAA0319LQ8IZA0 1049 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 ZNF507Q8TCN5 953 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 COPS5Q92905 334 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 RACGAP1Q9H0H5 632 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 CDH19Q9H159 772 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 C8orf33Q9H7E9 229 aaPredicted RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 IMPAD1Q9NX62 359 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 ATRNO75882 1429 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 O00370 1275 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 BTKQ06187 659 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 FOXM1Q08050 763 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 EMC10Q5UCC4 262 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 SLC44A2Q8IWA5 706 aaPredicted RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 TUBGCP3Q96CW5 907 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 ACE2Q9BYF1 805 aaPredicted RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 TAF6LQ9Y6J9 622 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 SPATA31D1Q6ZQQ2 1576 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 DTNBO60941 627 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 SLC25A14O95258 325 aaPredicted RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 CLK2P49760 499 aaKnown RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 PSMD4P55036 377 aaKnown RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 DUSP4Q13115 394 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 CBWD6Q4V339 395 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 PDSS1Q5T2R2 415 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 VITQ6UXI7 678 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 TMC5Q6UXY8 1006 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 GKN2Q86XP6 184 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 KSR1Q8IVT5 923 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 FOXJ1Q92949 421 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 THUMPD3Q9BV44 507 aaKnown RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 ROGDIQ9GZN7 287 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 BTBD1Q9H0C5 482 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 LMAN2LQ9H0V9 348 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 ASB8Q9H765 288 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 INTS10Q9NVR2 710 aaKnown RBP11.28□□□□□ -0.6
VPS8-227ENST00000625842 ANKRD6Q9Y2G4 727 aa11.28□□□□□ -0.6
VPS8-227ENST00000625842 A0A1W2PQJ5 194 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 UBXN7O94888 489 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 UMPSP11172 480 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 AVPR1BP47901 424 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.27□□□□□ -0.6
VPS8-227ENST00000625842 MIIPQ5JXC2 388 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 RAP1GAP2Q684P5 730 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 RASAL3Q86YV0 1011 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 NKAPQ8N5F7 415 aaKnown RBP11.27□□□□□ -0.6
VPS8-227ENST00000625842 KCNK16Q96T55 309 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 RAB11FIP5Q9BXF6 653 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 SCN3BQ9NY72 215 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 ZFP69BQ9UJL9 534 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 CDH7Q9ULB5 785 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 KCNE2Q9Y6J6 123 aa11.27□□□□□ -0.6
VPS8-227ENST00000625842 A0A087X0T9 212 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 NT5C1B-RDH14C9J2C7 533 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 SF3A3Q12874 501 aaKnown RBP eCLIP11.27□□□□□ -0.61
VPS8-227ENST00000625842 SF3B4Q15427 424 aaKnown RBP eCLIP11.27□□□□□ -0.611e-7■■■■□ 24.8
VPS8-227ENST00000625842 SMTNL2Q2TAL5 461 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 DUS1LQ6P1R4 473 aaKnown RBP11.27□□□□□ -0.61
VPS8-227ENST00000625842 FMR1NBQ8N0W7 255 aaPredicted RBP11.27□□□□□ -0.61
VPS8-227ENST00000625842 TMEM245Q9H330 911 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 IL23AQ9NPF7 189 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 ARL15Q9NXU5 204 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 PRKAG3Q9UGI9 489 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 F8VP50 259 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 FZD9O00144 591 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 PJA2O43164 708 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 KERAO60938 352 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 ATP1A3P13637 1013 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 CYP2F1P24903 491 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 IRF8Q02556 426 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 PDE1CQ14123 709 aaPredicted RBP11.27□□□□□ -0.61
VPS8-227ENST00000625842 OTOP1Q7RTM1 612 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 ILKAPQ9H0C8 392 aaPredicted RBP11.27□□□□□ -0.61
VPS8-227ENST00000625842 SH3BP4Q9P0V3 963 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 COPS7AQ9UBW8 275 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 C19orf25Q9UFG5 118 aaPredicted RBP11.27□□□□□ -0.61
VPS8-227ENST00000625842 HPS5Q9UPZ3 1129 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 ASF1AQ9Y294 204 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 NR1D1P20393 614 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 CRABP2P29373 138 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 CNGA2Q16280 664 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 TREML2Q5T2D2 321 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 STOX1Q6ZVD7 989 aa11.27□□□□□ -0.61
VPS8-227ENST00000625842 FAM71DQ8N9W8 422 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms