RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 BMP10O95393 424 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 PORP16435 677 aaPredicted RBP14.39□□□□□ -0.11
LDB3-209ENST00000623056 CYP3A5P20815 502 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 FGFR3P22607 806 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 PHKA2P46019 1235 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 SP2Q02086 613 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 ANKDD1AQ495B1 522 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 SMYD5Q6GMV2 418 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 NSUN6Q8TEA1 469 aaKnown RBP14.39□□□□□ -0.11
LDB3-209ENST00000623056 LRTOMTQ8WZ04 291 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 CDHR1Q96JP9 859 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 NPAS2Q99743 824 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 EBF1Q9UH73 591 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 ADAM28Q9UKQ2 775 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 RAP2CQ9Y3L5 183 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 AP4S1Q9Y587 144 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 SCN4AP35499 1836 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 A0A096LPK6 155 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 KANSL1LA0AUZ9 987 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 PLOD2O00469 737 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 TRIM38O00635 465 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 DPYSL4O14531 572 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 GRID2O43424 1007 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 RPL14P50914 215 aaKnown RBP14.38□□□□□ -0.11
LDB3-209ENST00000623056 PHEXP78562 749 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 PTK2BQ14289 1009 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 DLG2Q15700 870 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 CLEC14AQ86T13 490 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 CLVS1Q8IUQ0 354 aaPredicted RBP14.38□□□□□ -0.11
LDB3-209ENST00000623056 FIBCD1Q8N539 461 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 COLGALT1Q8NBJ5 622 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 HM13Q8TCT9 377 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 RSPH1Q8WYR4 309 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 CERS2Q96G23 380 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 PGLYRP2Q96PD5 576 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 RBBP8Q99708 897 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 SLC29A1Q99808 456 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 NIFKQ9BYG3 293 aaKnown RBP14.38□□□□□ -0.11
LDB3-209ENST00000623056 MAGEB5Q9BZ81 275 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 TRPV6Q9H1D0 765 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 DHX35Q9H5Z1 703 aaKnown RBP14.38□□□□□ -0.11
LDB3-209ENST00000623056 ZBTB26Q9HCK0 441 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 INIPQ9NRY2 104 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 TUBGCP4Q9UGJ1 667 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 A0A0A0MRY4 1105 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 TCAF2A6NFQ2 919 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 SPATA31C2B4DYI2 1134 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 B4GALT4O60513 344 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 CBFA2T3O75081 653 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 C8BP07358 591 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 VDRP11473 427 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 ADSLP30566 484 aaPredicted RBP14.38□□□□□ -0.11
LDB3-209ENST00000623056 SDC4P31431 198 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 RGS7P49802 495 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 NXNQ6DKJ4 435 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 GPR141Q7Z602 305 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 HTR3CQ8WXA8 447 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 ISOC1Q96CN7 298 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 ASB9Q96DX5 294 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 SPATA13Q96N96 652 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 AGAP3Q96P47 875 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 NAT9Q9BTE0 207 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 CAB39LQ9H9S4 337 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 CLK4Q9HAZ1 481 aaKnown RBP14.38□□□□□ -0.11
LDB3-209ENST00000623056 NMRAL1Q9HBL8 299 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 GBA2Q9HCG7 927 aaPredicted RBP14.38□□□□□ -0.11
LDB3-209ENST00000623056 C20orf96Q9NUD7 363 aaPredicted RBP14.38□□□□□ -0.11
LDB3-209ENST00000623056 OXSMQ9NWU1 459 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 ADA2Q9NZK5 511 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 ZNF232Q9UNY5 417 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 HES2Q9Y543 173 aa14.38□□□□□ -0.11
LDB3-209ENST00000623056 C9IYK1 514 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 TOMM70O94826 608 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 PIGNO95427 931 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 PRKCBP05771 671 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 TFPTP0C1Z6 253 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 ABCG1P45844 678 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 NR2C2P49116 596 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 EFNA5P52803 228 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 CTBSQ01459 385 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 MTX3Q5HYI7 312 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 FSTL4Q6MZW2 842 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 MAMDC4Q6UXC1 1216 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 STRA8Q7Z7C7 330 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 GPR180Q86V85 440 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 CNTD1Q8N815 330 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 ZNF513Q8N8E2 541 aaPredicted RBP14.37□□□□□ -0.11
LDB3-209ENST00000623056 C12orf43Q96C57 262 aaKnown RBP14.37□□□□□ -0.11
LDB3-209ENST00000623056 VPS45Q9NRW7 570 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 DTLQ9NZJ0 730 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 CDYLQ9Y232 598 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 WDR37Q9Y2I8 494 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 MFHAS1Q9Y4C4 1052 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 MGAMO43451 1857 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 ZNF487B1APH4 448 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 VWA5AO00534 786 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 MPOP05164 745 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 JUNP05412 331 aaKnown RBP14.37□□□□□ -0.11
LDB3-209ENST00000623056 POLBP06746 335 aa14.37□□□□□ -0.11
LDB3-209ENST00000623056 ZFXP17010 805 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms