RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 RPL26P61254 145 aaKnown RBP9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 COG7P83436 770 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 XIAPP98170 497 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 NME3Q13232 169 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 ITGA9Q13797 1035 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 ARL13BQ3SXY8 428 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 FAM72AQ5TYM5 149 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 KIAA0319Q5VV43 1072 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 C1orf146Q5VVC0 180 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 BSPRYQ5W0U4 402 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 PM20D1Q6GTS8 502 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 OR52E8Q6IFG1 317 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 FAM72DQ6L9T8 149 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 CES3Q6UWW8 571 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 FAM35AQ86V20 835 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 FAM72BQ86X60 149 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 TP53INP2Q8IXH6 220 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 PLD6Q8N2A8 252 aaKnown RBP9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 URGCPQ8TCY9 931 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 SREK1Q8WXA9 508 aaKnown RBP9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 BRI3BPQ8WY22 251 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 IRGQQ8WZA9 623 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 JADE3Q92613 823 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 CMTM5Q96DZ9 223 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 IFT43Q96FT9 208 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 SENP8Q96LD8 212 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 TEKT5Q96M29 485 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 SMOQ99835 787 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 ECSITQ9BQ95 431 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 RTKNQ9BST9 563 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 CCDC28BQ9BUN5 200 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 CEP41Q9BYV8 373 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 IL22Q9GZX6 179 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 GOLGA2P5Q9HBQ8 144 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 ANLNQ9NQW6 1124 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 PIH1D1Q9NWS0 290 aaKnown RBP9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 NDE1Q9NXR1 346 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 SCOCQ9UIL1 159 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 ASB3Q9Y575 518 aa9.82□□□□□ -0.84
IGHV3-54-201ENST00000622166 SYNJ2BP-COX16A0A087WUM0 186 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 A0A096LPK6 155 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 CCL15-CCL14A0A0B4J2E2 113 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 YJEFN3A6XGL0 299 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 MEI4A8MW99 385 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 I6L893 689 aaPredicted RBP9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 KCNK1O00180 336 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 SLC22A2O15244 555 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 SKAP2O75563 359 aaPredicted RBP9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 NEBLO76041 1014 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 HSPA4LO95757 839 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 LTFP02788 710 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 C2P06681 752 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 COL6A2P12110 1019 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 COX4I1P13073 169 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 NFKB1P19838 968 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 ITGAXP20702 1163 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 ACAT1P24752 427 aaKnown RBP9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 HOXC8P31273 242 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 SERPINB6P35237 376 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 TUBP50607 506 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 MAP3K7CLP57077 242 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 IRX1P78414 480 aaPredicted RBP9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 SLC25A3Q00325 362 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 KLF10Q13118 480 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 MPP3Q13368 585 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 CCNIQ14094 377 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 PRPSAP1Q14558 356 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 CCL15Q16663 113 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 FSTL4Q6MZW2 842 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZYG11AQ6WRX3 759 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 BHLHA9Q7RTU4 235 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 CMC1Q7Z7K0 106 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 LINC00523Q86TU6 105 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 RSPH3Q86UC2 560 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 KCNMB4Q86W47 210 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 CCDC117Q8IWD4 279 aaPredicted RBP9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 NETO2Q8NC67 525 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZMIZ2Q8NF64 920 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZSCAN18Q8TBC5 510 aaPredicted RBP9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 UCMAQ8WVF2 138 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 GPR22Q99680 433 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 EPAS1Q99814 870 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 KIFC1Q9BW19 673 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 GATA5Q9BWX5 397 aaPredicted RBP9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 OSBPL2Q9H1P3 480 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 SLC38A7Q9NVC3 462 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 ZNF358Q9NW07 568 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 COX16Q9P0S2 106 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 PDP2Q9P2J9 529 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 CDH9Q9ULB4 789 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 PPM1HQ9ULR3 514 aa9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 TRIP12Q14669 1992 aaPredicted RBP9.81□□□□□ -0.84
IGHV3-54-201ENST00000622166 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.8□□□□□ -0.84
IGHV3-54-201ENST00000622166 TREHO43280 583 aa9.8□□□□□ -0.84
IGHV3-54-201ENST00000622166 AP1G2O75843 785 aa9.8□□□□□ -0.84
IGHV3-54-201ENST00000622166 CABYRO75952 493 aa9.8□□□□□ -0.84
IGHV3-54-201ENST00000622166 AMHP03971 560 aa9.8□□□□□ -0.84
IGHV3-54-201ENST00000622166 PIM1P11309 404 aaPredicted RBP9.8□□□□□ -0.84
IGHV3-54-201ENST00000622166 YBX3P16989 372 aaKnown RBP eCLIP9.8□□□□□ -0.84
IGHV3-54-201ENST00000622166 ADSLP30566 484 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms