RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 FAM228AQ86W67 206 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 ARL14EPQ8N8R7 260 aaPredicted RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 CXorf40AQ8TE69 158 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 ZNF333Q96JL9 665 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 TBL1YQ9BQ87 522 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 THUMPD3Q9BV44 507 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 NMRK1Q9NWW6 199 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 MORF4L1Q9UBU8 362 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 DCDC2Q9UHG0 476 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 STXBP5LQ9Y2K9 1186 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 SLC45A1Q9Y2W3 748 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 V9GYQ6 96 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 COL1A1P02452 1464 aaPredicted RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 RNF225M0QZC1 329 aaPredicted RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 PHGDHO43175 533 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 NDUFS2O75306 463 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 PIAS1O75925 651 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 STAU1O95793 577 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 OR56A5P0C7T3 313 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 CORO1AP31146 461 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 PURAQ00577 322 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 NR6A1Q15406 480 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 TRIM60Q495X7 471 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 ICA1LQ8NDH6 482 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 MCOLN3Q8TDD5 553 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 DQX1Q8TE96 717 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 PCDHB18PQ96TA0 734 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 THTPAQ9BU02 230 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 DPEP3Q9H4B8 488 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 PTPRHQ9HD43 1115 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 RNF186Q9NXI6 227 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 SPACA6W5XKT8 324 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 A0A096LPK6 155 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 B2RBV5 119 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 OPLAHO14841 1288 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TPBGLP0DKB5 382 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 PCNAP12004 261 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 MAGEA9P43362 315 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ITGA9Q13797 1035 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 SLC25A52Q3SY17 297 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 LRRC38Q5VT99 294 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ICE2Q659A1 982 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 PSRC1Q6PGN9 363 aaPredicted RBP9.4□□□□□ -0.9
GGA3-223ENST00000621870 BBS12Q6ZW61 710 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 PSTKQ8IV42 348 aaKnown RBP9.4□□□□□ -0.9
GGA3-223ENST00000621870 MTBPQ96DY7 904 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 CCDC126Q96EE4 140 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 SERAC1Q96JX3 654 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 SNX27Q96L92 541 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ACBD6Q9BR61 282 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ECT2Q9H8V3 914 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 NDOR1Q9UHB4 597 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 SNED1Q8TER0 1413 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3DA0A087WVF3 549 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3IA0A087WXS9 549 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3EA0A087X179 549 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3KA0A087X1G2 549 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3FA6NER0 549 aaPredicted RBP9.4□□□□□ -0.9
GGA3-223ENST00000621870 MGAT4DA6NG13 374 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3LB9A6J9 549 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 NRP1O14786 923 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D4O60343 1298 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ADH1CP00326 375 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ERBB2P04626 1255 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 CYP1A2P05177 515 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 SLC10A3P09131 477 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3HP0C7X1 549 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 KCNA3P22001 575 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 IL10P22301 178 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ADSSP30520 456 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 RAD23BP54727 409 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ZNF792Q3KQV3 632 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3GQ6DHY5 549 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 RAET1GQ6H3X3 334 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3CQ6IPX1 549 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TBC1D3Q8IZP1 549 aaPredicted RBP9.4□□□□□ -0.9
GGA3-223ENST00000621870 TRIB2Q92519 343 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 MYCBPQ99417 103 aaPredicted RBP9.4□□□□□ -0.9
GGA3-223ENST00000621870 TEX12Q9BXU0 123 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 F2P00734 622 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 GPR1P46091 355 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 PRIM2P49643 509 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 VEGFBP49765 207 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 PRKAA1Q13131 559 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 KRT72Q14CN4 511 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 BRMS1LQ5PSV4 323 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 RARS2Q5T160 578 aaKnown RBP9.4□□□□□ -0.9
GGA3-223ENST00000621870 LDLRAD1Q5T700 205 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TEDDM1Q5T9Z0 273 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 WDR93Q6P2C0 686 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 SRLQ86TD4 932 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 LRRN4CLQ8ND94 238 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 DTX3LQ8TDB6 740 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 PANX3Q96QZ0 392 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TSPAN18Q96SJ8 248 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 ETNK2Q9NVF9 386 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 SELENONQ9NZV5 590 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 AGO1Q9UL18 857 aaKnown RBP9.4□□□□□ -0.9
GGA3-223ENST00000621870 RAB23Q9ULC3 237 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms