RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 GOLGA8NF8WBI6 632 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PEX11AO75192 247 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SRP72O76094 671 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ACADMP11310 421 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 GM2AP17900 193 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ZNF132P52740 706 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 TBX4P57082 545 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ENPEPQ07075 957 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 COL9A2Q14055 689 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 CCDC85BQ15834 202 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SH3PXD2AQ5TCZ1 1133 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 RFWD3Q6PCD5 774 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ADGRD1Q6QNK2 874 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 IGDCC3Q8IVU1 814 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 NAT8LQ8N9F0 302 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 C18orf25Q96B23 403 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 SRPK1Q96SB4 655 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PPCSQ9HAB8 311 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 IARS2Q9NSE4 1012 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 ARL8BQ9NVJ2 186 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 PAK5Q9P286 719 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 CYTH4Q9UIA0 394 aa8.45□□□□□ -1.06
PTPDC1-204ENST00000620992 KIAA1217Q5T5P2 1943 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TCRBV9S1A1TA0A576 114 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 SERPINI2O75830 405 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TMCC1O94876 653 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 ERBB2P04626 1255 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 ASGR1P07306 291 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 MYL2P10916 166 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 HNF4AP41235 474 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 NDUFV1P49821 464 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 STX3Q13277 289 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 ERAP2Q6P179 960 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TRMT11Q7Z4G4 463 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 RIOX2Q8IUF8 465 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 MECRQ9BV79 373 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 RERGLQ9H628 205 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 MARCH2Q9P0N8 246 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 CNTN6Q9UQ52 1028 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 CCDC22O60826 627 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 RAMP2O60895 175 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 PIGRP01833 764 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 IFNA8P32881 189 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 PTDSS1P48651 473 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC25A11Q02978 314 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 DUSP4Q13115 394 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 ITGA7Q13683 1181 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 RCN1Q15293 331 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 CCL14Q16627 93 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 ZPBP2Q6X784 338 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TTC7BQ86TV6 843 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 ARFGAP1Q8N6T3 406 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 SERAC1Q96JX3 654 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 SPACA7Q96KW9 195 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 B3GALT6Q96L58 329 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 ACO2Q99798 780 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 CNPY3Q9BT09 278 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 WWOXQ9NZC7 414 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 HMGXB4Q9UGU5 601 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 BARX2Q9UMQ3 279 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 H7C4K7 107 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 APOC4-APOC2K7ER74 178 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 MDM4O15151 490 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TM9SF1O15321 606 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 MSCO60682 206 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 KATNA1O75449 491 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 APOC2P02655 101 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TPBGLP0DKB5 382 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 LHX1P48742 406 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 POU4F1Q01851 419 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 MARC1Q5VT66 337 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 KIAA1324Q6UXG2 1013 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 POLNQ7Z5Q5 900 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 IFNLR1Q8IU57 520 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TMEM192Q8IY95 271 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 DCAKDQ8WVC6 231 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 PRR11Q96HE9 360 aaPredicted RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 NFKBIZQ9BYH8 718 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TDRKHQ9Y2W6 561 aaKnown RBP8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 TRPV2Q9Y5S1 764 aa8.44□□□□□ -1.06
PTPDC1-204ENST00000620992 NBASA2RRP1 2371 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 FAM237BA0A1B0GVD1 139 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 HOXA2O43364 376 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 RNASEH1O60930 286 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 YBX3P16989 372 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 ASPAP45381 313 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 RGS4P49798 205 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 MAXP61244 160 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 FUT11Q495W5 492 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 RAP1GAP2Q684P5 730 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CFAP52Q8N1V2 620 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 MAB21L3Q8N8X9 362 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 BANPQ8N9N5 519 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 TKTL2Q9H0I9 626 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CDT1Q9H211 546 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 TLR8Q9NR97 1041 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 BTBD7Q9P203 1132 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 MYO1GB0I1T2 1018 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 NFKBIEO00221 500 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms