RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 EIF3EP60228 445 aaKnown RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 ECT2LQ008S8 904 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 RALGDSQ12967 914 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 PMS2P3Q13401 168 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 TFDP1Q14186 410 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 MGAT5BQ3V5L5 792 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 TEX44Q53QW1 395 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 SH2D5Q6ZV89 423 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 CRLF3Q8IUI8 442 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 ZC3H7AQ8IWR0 971 aaKnown RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 DAW1Q8N136 415 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 SEMA4DQ92854 862 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 SH3YL1Q96HL8 342 aaPredicted RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 PAFAH2Q99487 392 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 VRTNQ9H8Y1 702 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 CPNE5Q9HCH3 593 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 HSPBP1Q9NZL4 362 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 PRPF19Q9UMS4 504 aaKnown RBP10.58□□□□□ -0.72
VPS11-207ENST00000620429 ST14Q9Y5Y6 855 aa10.58□□□□□ -0.72
VPS11-207ENST00000620429 DYRK3O43781 588 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 NKX2-5P52952 324 aaPredicted RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 MRPS22P82650 360 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 OTUD4Q01804 1114 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 CXCL9Q07325 125 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 IKBKEQ14164 716 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 MAPRE1Q15691 268 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 PGS1Q32NB8 556 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 PERM1Q5SV97 790 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 UGT3A1Q6NUS8 523 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 LLGL2Q6P1M3 1020 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 DCAKDQ8WVC6 231 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 DHX38Q92620 1227 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 TRIM63Q969Q1 353 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 UQCC2Q9BRT2 126 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 STRA6Q9BX79 667 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 TMEM206Q9H813 350 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS11-207ENST00000620429 GMIPQ9P107 970 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 UBA2Q9UBT2 640 aaPredicted RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 KLQ9UEF7 1012 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 ZNFX1Q9P2E3 1918 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 CA12O43570 354 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 ASNA1O43681 348 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 SNNO75324 88 aaPredicted RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 ITGBL1O95965 494 aaPredicted RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 ITIH1P19827 911 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 MAP4P27816 1152 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 TAGLNQ01995 201 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 C2CD6Q53TS8 623 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 DSG4Q86SJ6 1040 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 COLGALT2Q8IYK4 626 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 E2F7Q96AV8 911 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 ACCSQ96QU6 501 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 SNX18Q96RF0 628 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 SERPINI1Q99574 410 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 EBF4Q9BQW3 602 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 LXNQ9BS40 222 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 ACSS3Q9H6R3 686 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 GPN2Q9H9Y4 310 aaPredicted RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 WBP1LQ9NX94 342 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 ABI2Q9NYB9 513 aaPredicted RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 KCND2Q9NZV8 630 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 ATPIF1Q9UII2 106 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 ARHGAP26Q9UNA1 814 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 TESMINQ9Y4I5 508 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 FAM25EA8MYX2 175 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 SNX2O60749 519 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 ZC3H11AO75152 810 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS11-207ENST00000620429 MT-ND3P03897 115 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 MYL4P12829 197 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 NELFEP18615 380 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 OPRL1P41146 370 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 GRM5P41594 1212 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 MLLT10P55197 1068 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 GPX6P59796 221 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 FCHO2Q0JRZ9 810 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 KLF1Q13351 362 aaPredicted RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 SELPLGQ14242 412 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 PADI6Q6TGC4 694 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 TRIM72Q6ZMU5 477 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 GALNT6Q8NCL4 622 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 SIMC1Q8NDZ2 872 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 TFB1MQ8WVM0 346 aaKnown RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 KLF6Q99612 283 aaPredicted RBP10.57□□□□□ -0.72
VPS11-207ENST00000620429 EMILIN2Q9BXX0 1053 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 XPNPEP1Q9NQW7 623 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 SNTG2Q9NY99 539 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 SIRPGQ9P1W8 387 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 VPS28Q9UK41 221 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 PCDHB4Q9Y5E5 795 aa10.57□□□□□ -0.72
VPS11-207ENST00000620429 EVPLLA8MZ36 301 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 WNT10BO00744 389 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 FAM155BO75949 473 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ADRB2P07550 413 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 CDH1P12830 882 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 KRT10P13645 584 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 NAMPTP43490 491 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 ATN1P54259 1190 aaPredicted RBP10.56□□□□□ -0.72
VPS11-207ENST00000620429 DSTNP60981 165 aa10.56□□□□□ -0.72
VPS11-207ENST00000620429 TMPRSS15P98073 1019 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 303.2 ms