RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CIAO1O76071 339 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 SERPINA6P08185 405 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 PRELPP51888 382 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 EIF5AL1Q6IS14 154 aaKnown RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 TMEM53Q6P2H8 277 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 USP17L2Q6R6M4 530 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 RPTNQ6XPR3 784 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 VANGL1Q8TAA9 524 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 ATXN3LQ9H3M9 355 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UPB1Q9UBR1 384 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 SULT1B1O43704 296 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 ULK1O75385 1050 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 ASNSP08243 561 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 PDGFRAP16234 1089 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 RCAN1P53805 252 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 RPL10AP62906 217 aaKnown RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 SH3D19Q5HYK7 790 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 AMIGO2Q86SJ2 522 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 HS6ST3Q8IZP7 471 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 CDYL2Q8N8U2 506 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 LRIG2O94898 1065 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 CYP2E1P05181 493 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 HOXB6P17509 224 aaKnown RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 PLAGL2Q9UPG8 496 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 ARHGEF10O15013 1369 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 C2orf71A6NGG8 1288 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 OR2AT4A6NND4 320 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 PRODHO43272 600 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A9O60656 530 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 CD2P06729 351 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A6P19224 532 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A1P22309 533 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A4P22310 534 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A3P35503 534 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A5P35504 534 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 YAP1P46937 504 aaKnown RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 KLK7P49862 253 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 ZMYND11Q15326 602 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 N4BP2L1Q5TBK1 243 aaPredicted RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 REXO5Q96IC2 774 aaKnown RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A7Q9HAW7 530 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A10Q9HAW8 530 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 UGT1A8Q9HAW9 530 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 TAS2R1Q9NYW7 299 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 KANTRA0A1W2PQU2 76 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 GPD1P21695 349 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 OFCC1Q8IZS5 231 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 SMG7Q92540 1137 aaKnown RBP15.26■□□□□ 0.03
COL5A1-208ENST00000618395 GTF3C4Q9UKN8 822 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 LYVE1Q9Y5Y7 322 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 AP3D1O14617 1153 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 SPARCP09486 303 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 ECT2LQ008S8 904 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 FEZF2Q8TBJ5 459 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 NSMCE3Q96MG7 304 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 PLEKHF1Q96S99 279 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 SLC22A4Q9H015 551 aa15.26■□□□□ 0.03
COL5A1-208ENST00000618395 ERP29P30040 261 aaKnown RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 MYBPC1Q00872 1141 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 CD83Q01151 205 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 CST11Q9H112 138 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 EEF2KO00418 725 aaKnown RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 FOXN1O15353 648 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 PER1O15534 1290 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 BNIP2Q12982 314 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 DPY30Q9C005 99 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 TRIM9Q9C026 710 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 FARSBQ9NSD9 589 aaKnown RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 DUSP10Q9Y6W6 482 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 SSX5O60225 188 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 SHOC2Q9UQ13 582 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 ACOT9Q9Y305 439 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 MZF1P28698 734 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 CAMK1Q14012 370 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 ATP13A4Q4VNC1 1196 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 SCN4BQ8IWT1 228 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 GATAD2BQ8WXI9 593 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 FAM20AQ96MK3 541 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 SSX3Q99909 188 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 LRRC40Q9H9A6 602 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 ILVBLA1L0T0 632 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 RPA3P35244 121 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 TIE1P35590 1138 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 NPY2RP49146 381 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 MGAT5Q09328 741 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 PCDHB2Q9Y5E7 798 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 NCF1BA6NI72 391 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 NCF1CA8MVU1 366 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 VPS26AO75436 327 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 NCF1P14598 390 aaPredicted RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 BCAMP50895 628 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 C6orf52Q5T4I8 152 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 TMPRSS11AQ6ZMR5 421 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 ANKRD13AQ8IZ07 590 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 ASB2Q96Q27 587 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 MRPL4Q9BYD3 311 aaKnown RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 GDF3Q9NR23 364 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 HOXC9P31274 260 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 PSMC5P62195 406 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 PIWIL2Q8TC59 973 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms