RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 MATKP42679 507 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 TBL3Q12788 808 aaKnown RBP13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 KLF10Q13118 480 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 PDK1Q15118 436 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 CNPY1Q3B7I2 92 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 OGFRL1Q5TC84 451 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 FRMD7Q6ZUT3 714 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 RSPH3Q86UC2 560 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 KBTBD6Q86V97 674 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 DEFB107AQ8IZN7 70 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 PYROXD2Q8N2H3 581 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 DCLK2Q8N568 766 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 C7orf31Q8N865 590 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 PIP4K2CQ8TBX8 421 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 SLC26A7Q8TE54 656 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 GDPD5Q8WTR4 605 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 RNF139Q8WU17 664 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 KCNK16Q96T55 309 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 DDX50Q9BQ39 737 aaKnown RBP13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 FERMT1Q9BQL6 677 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 EPB41L1Q9H4G0 881 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 NR2E3Q9Y5X4 410 aa13.21□□□□□ -0.3
CLTCL1-210ENST00000617926 G3V2L1 256 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 SLC22A2O15244 555 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 SEPT4O43236 478 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 ZBTB14O43829 449 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 MPOP05164 745 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 PABPC4LP0CB38 370 aaKnown RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 GLDCP23378 1020 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 PEX2P28328 305 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 SPRP35270 261 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 CSRP3P50461 194 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 ERFP50548 548 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 CLCN2P51788 898 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 HK2P52789 917 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 EPHB1P54762 984 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 AQP4P55087 323 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 DYNC1I2Q13409 638 aaKnown RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 DPYSQ14117 519 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 SLC25A52Q3SY17 297 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 PPM1JQ5JR12 505 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 UBE2Q1Q7Z7E8 422 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 ZNF567Q8N184 647 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 PHTF2Q8N3S3 785 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 DIS3LQ8TF46 1054 aaKnown RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 KBTBD7Q8WVZ9 684 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 NT5C3BQ969T7 300 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 PGBD4Q96DM1 585 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 CNDP1Q96KN2 507 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 ZMAT2Q96NC0 199 aaKnown RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 HAPLN3Q96S86 360 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 PPP1R16BQ96T49 567 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 GORASP1Q9BQQ3 440 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 MCMBPQ9BTE3 642 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 LRRC40Q9H9A6 602 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 DMAP1Q9NPF5 467 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 CPSF2Q9P2I0 782 aaKnown RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 TXNDC16Q9P2K2 825 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 VPS28Q9UK41 221 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 OGDHLQ9ULD0 1010 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
CLTCL1-210ENST00000617926 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 SORBS2O94875 1100 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 LCP1P13796 627 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 RAG1P15918 1043 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 GSTT1P30711 240 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 SULT1E1P49888 294 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 POLE2P56282 527 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 MED21Q13503 144 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 CUL3Q13618 768 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 LAMC2Q13753 1193 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 ANKRD20A4Q4UJ75 823 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 VWA5B1Q5TIE3 1220 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 LIMS2Q7Z4I7 341 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 TMEM135Q86UB9 458 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 TMEM126BQ8IUX1 230 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 BEST2Q8NFU1 509 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 OR6B3Q8NGW1 331 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 FCRL3Q96P31 734 aaPredicted RBP13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 COG4Q9H9E3 785 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 CASS4Q9NQ75 786 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 PDGFCQ9NRA1 345 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 MID2Q9UJV3 735 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 RPS6KL1Q9Y6S9 549 aa13.19□□□□□ -0.3
CLTCL1-210ENST00000617926 F5H423 210 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 DCLK1O15075 740 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 DCXO43602 365 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 RTN3O95197 1032 aaPredicted RBP13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 HSPA4LO95757 839 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 AP2A1O95782 977 aa13.18□□□□□ -0.3
CLTCL1-210ENST00000617926 VCLP18206 1134 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms