RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 TBC1D17Q9HA65 648 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 PRDM16Q9HAZ2 1276 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 VPS28Q9UK41 221 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 MRPS17Q9Y2R5 130 aaKnown RBP16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 KANSL1LA0AUZ9 987 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 ANTXRLA6NF34 631 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 K7EQS6 105 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 SLC34A2O95436 690 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 ZFXP17010 805 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-204ENST00000617222 POLR2EP19388 210 aaKnown RBP16■□□□□ 0.15
PCDHGC3-204ENST00000617222 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
PCDHGC3-204ENST00000617222 CXCR5P32302 372 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 PTPN7P35236 360 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 SERPINB6P35237 376 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 TNFRSF4P43489 277 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 ETF1P62495 437 aaKnown RBP16■□□□□ 0.15
PCDHGC3-204ENST00000617222 DMC1Q14565 340 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 UBXN2BQ14CS0 331 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 SEL1L2Q5TEA6 688 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 EMC10Q5UCC4 262 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 AFMIDQ63HM1 303 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 IL31Q6EBC2 164 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 ZNF354CQ86Y25 554 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 CCDC33Q8N5R6 958 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 PLD5Q8N7P1 536 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 NELL2Q99435 816 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 NAPGQ99747 312 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-204ENST00000617222 HERPUD2Q9BSE4 406 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 FOXQ1Q9C009 403 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 CIPCQ9C0C6 399 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 CARD9Q9H257 536 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 ATP13A1Q9HD20 1204 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 LTB4R2Q9NPC1 389 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 ELOVL2Q9NXB9 296 aa16■□□□□ 0.15
PCDHGC3-204ENST00000617222 MTF2Q9Y483 593 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-204ENST00000617222 COL4A3Q01955 1670 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 ARHGAP42A6NI28 874 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 FAM170BA6NMN3 283 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 DFFAO00273 331 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 TIMM44O43615 452 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 MFSD11O43934 449 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 CEP104O60308 925 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 SNAP91O60641 907 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 MAP3K6O95382 1288 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 GLDCP23378 1020 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 ETFBP38117 255 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 PAPOLAP51003 745 aaKnown RBP15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 SEC13P55735 322 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 GBE1Q04446 702 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 SLC10A2Q12908 348 aaPredicted RBP15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 PARP15Q460N3 678 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 NPNTQ6UXI9 565 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 SYT10Q6XYQ8 523 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 NYAP1Q6ZVC0 841 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 SORCS1Q8WY21 1168 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 TTC17Q96AE7 1141 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 C16orf45Q96MC5 204 aaPredicted RBP15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 ACE2Q9BYF1 805 aaPredicted RBP15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 RBM12Q9NTZ6 932 aaKnown RBP15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 EFR3BQ9Y2G0 817 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 HEY1Q9Y5J3 304 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 COL4A2P08572 1712 aa15.99■□□□□ 0.15
PCDHGC3-204ENST00000617222 CTAGE9A4FU28 777 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 CBX4O00257 560 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 TJP3O95049 919 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 PDGFBP01127 241 aaPredicted RBP15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 ATP5BP06576 529 aaKnown RBP15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 CHRNB1P11230 501 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 CASQ1P31415 396 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 CTSOP43234 321 aaPredicted RBP15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 SERINC3Q13530 473 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 CCDC181Q5TID7 509 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 ARHGAP36Q6ZRI8 547 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 BBS12Q6ZW61 710 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 ZNF687Q8N1G0 1237 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 FLCNQ8NFG4 579 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 CYB5D2Q8WUJ1 264 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 UCMAQ8WVF2 138 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 PBKQ96KB5 322 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 MFSD1Q9H3U5 465 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 LMAN1LQ9HAT1 526 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 DTLQ9NZJ0 730 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 SAE1Q9UBE0 346 aaPredicted RBP15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 VPS51Q9UID3 782 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 HCN2Q9UL51 889 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 HPCAL4Q9UM19 191 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 SNX12Q9UMY4 172 aa15.98■□□□□ 0.15
PCDHGC3-204ENST00000617222 NCOR1O75376 2440 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 TMEM221A6NGB7 291 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 M0R296 226 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 FANCGO15287 622 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 KDELR3O43731 214 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 ZMPSTE24O75844 475 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 DLDP09622 509 aaKnown RBP15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 PECAM1P16284 738 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 TGM2P21980 687 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 TIE1P35590 1138 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 ECT2LQ008S8 904 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 SULT2A1Q06520 285 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms