RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CSDE1O75534 798 aaKnown RBP13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 PTPN1P18031 435 aaKnown RBP13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 BLVRAP53004 296 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 MFSD14BQ5SR56 506 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 CPT1BQ92523 772 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 ZNF486Q96H40 463 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 CCDC106Q9BWC9 280 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 PTPRHQ9HD43 1115 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 PCDH10Q9P2E7 1040 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 RWDD3Q9Y3V2 267 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 CRYBG1Q9Y4K1 1723 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 N4BP2Q86UW6 1770 aaPredicted RBP13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 BTN3A3O00478 584 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 PRELPP51888 382 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 PHKG1Q16816 387 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 SULT1C3Q6IMI6 304 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 NXNL1Q96CM4 212 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 TMEM8AQ9HCN3 771 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 IFT52Q9Y366 437 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 IFT172Q9UG01 1749 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 NEO1Q92859 1461 aa13.79□□□□□ -0.2
PPP4R3B-205ENST00000616288 RNASEH2AO75792 299 aaKnown RBP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 PRKCBP05771 671 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 ARL4AP40617 200 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 ACOT2P49753 483 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 GRM2Q14416 872 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 PID1Q7Z2X4 250 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 UNC45BQ8IWX7 931 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 PGAM4Q8N0Y7 254 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 TTC30BQ8N4P2 665 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 RDM1Q8NG50 284 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 KCTD4Q8WVF5 259 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 CEP170P1Q96L14 293 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 VPS35Q96QK1 796 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 SPAG4Q9NPE6 437 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 TBC1D22BQ9NU19 505 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 A0A1B0GTW7 788 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 H3BMQ9 156 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 ICMTO60725 284 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 FCGR1AP12314 374 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 SLC12A3P55017 1021 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 RPL7AP62424 266 aaKnown RBP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 MERTKQ12866 999 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 DLG2Q15700 870 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 TYSND1Q2T9J0 566 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 RAB44Q7Z6P3 723 aaPredicted RBP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 FBXL20Q96IG2 436 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 COG8Q96MW5 612 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 SLX1AQ9BQ83 275 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 HSD17B4P51659 736 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 CHRNB3Q05901 458 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 SPPL2CQ8IUH8 684 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 SEPT8Q92599 483 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 CDK5RAP1Q96SZ6 601 aaKnown RBP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 HGH1Q9BTY7 390 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 PCDHGC3Q9UN70 934 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 PCDHGB4Q9UN71 923 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 PCDHGB5Q9Y5G0 923 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 SLIT1O75093 1534 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 CCDC182A6NF36 153 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 KCNU1A8MYU2 1149 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 AREL1O15033 823 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 HDAC3O15379 428 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 RPL14P50914 215 aaKnown RBP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 NFATC3Q12968 1075 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 PMS2P3Q13401 168 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 TMEM198Q66K66 360 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 TWF2Q6IBS0 349 aaKnown RBP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 DENND5AQ6IQ26 1287 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 PLEKHM3Q6ZWE6 761 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 STRA8Q7Z7C7 330 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 DCAKDQ8WVC6 231 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 HAS1Q92839 578 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 CCSER2Q9H7U1 834 aa13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 IFT80Q9P2H3 777 aaPredicted RBP13.78□□□□□ -0.2
PPP4R3B-205ENST00000616288 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 TGFB1I1O43294 461 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 HTRA2O43464 458 aaPredicted RBP13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 HS6ST1O60243 411 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 HLA-DRAP01903 254 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 POLBP06746 335 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 PRKAA1Q13131 559 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 AP3B2Q13367 1082 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 GTF2H3Q13889 308 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 NANOGP8Q6NSW7 305 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 GPAT2Q6NUI2 795 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 PPP1R18Q6NYC8 613 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 KLHL17Q6TDP4 642 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 ZBTB33Q86T24 672 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 ERO1BQ86YB8 467 aa13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 CDKL3Q8IVW4 592 aaPredicted RBP13.77□□□□□ -0.2
PPP4R3B-205ENST00000616288 ZNF781Q8N8C0 355 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms