RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ATP6V0D2Q8N8Y2 350 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 PTPRN2Q92932 1015 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 SKA1Q96BD8 255 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 PRMT1Q99873 361 aaKnown RBP19.53■□□□□ 0.72
CDX1-202ENST00000616154 GANQ9H2C0 597 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 EBF2Q9HAK2 575 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 TAB2Q9NYJ8 693 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 GPSM3Q9Y4H4 160 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 KNTC1P50748 2209 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 LRRC10BA6NIK2 292 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 GOLGA8CPA6NN73 597 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 PNMA6AP0CW24 399 aaPredicted RBP19.52■□□□□ 0.72
CDX1-202ENST00000616154 SLC2A3P11169 496 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 ZNF18P17022 549 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 GOT1P17174 413 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 STK19P49842 368 aaPredicted RBP19.52■□□□□ 0.72
CDX1-202ENST00000616154 IL9RQ01113 521 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 SULT2A1Q06520 285 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 ELAVL3Q14576 367 aaKnown RBP19.52■□□□□ 0.72
CDX1-202ENST00000616154 TAF5Q15542 800 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 SND1Q7KZF4 910 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDX1-202ENST00000616154 STK40Q8N2I9 435 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 MDM1Q8TC05 714 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 PPP1R13BQ96KQ4 1090 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 RPL10LQ96L21 214 aaKnown RBP19.52■□□□□ 0.72
CDX1-202ENST00000616154 SLC2A13Q96QE2 648 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 STK33Q9BYT3 514 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 HSD3B7Q9H2F3 369 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 FAM204AQ9H8W3 233 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 FANCLQ9NW38 375 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 DKK4Q9UBT3 224 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 SLC12A6Q9UHW9 1150 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 TPX2Q9ULW0 747 aaKnown RBP19.52■□□□□ 0.72
CDX1-202ENST00000616154 CELSR3Q9NYQ7 3312 aa19.52■□□□□ 0.72
CDX1-202ENST00000616154 A0A1B0GVM2 712 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 TCAF2A6NFQ2 919 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 F8VZ95 297 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 WNT1P04628 370 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 HOXB3P14651 431 aaPredicted RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 CYP11B1P15538 503 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 PDGFRAP16234 1089 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 MZF1P28698 734 aaPredicted RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 NNMTP40261 264 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 PLK1P53350 603 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 ADPRHP54922 357 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 RABGAP1LQ5R372 815 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 OLFML1Q6UWY5 402 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 CCAR2Q8N163 923 aaKnown RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 NOX5Q96PH1 765 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 ELF4Q99607 663 aaPredicted RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 FTSJ1Q9UET6 329 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 LIMA1Q9UHB6 759 aaKnown RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 A0A1W2PR77 199 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 CD38P28907 300 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 KRT9P35527 623 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 VASPP50552 380 aaPredicted RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 OXCT1P55809 520 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 CDK17Q00537 523 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 RAPGEF1Q13905 1077 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 SMAD1Q15797 465 aaKnown RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 PTPN20Q4JDL3 420 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 CXorf57Q6NSI4 855 aaKnown RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 SLC26A9Q7LBE3 791 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 APTXQ7Z2E3 356 aaKnown RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 CIR1Q86X95 450 aaPredicted RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 DEFB106AQ8N104 65 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 AOPEPQ8N6M6 819 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 C1orf131Q8NDD1 294 aaKnown RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 ZNF397Q8NF99 534 aaPredicted RBP19.51■□□□□ 0.71
CDX1-202ENST00000616154 FAM131CQ96AQ9 280 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 AASDHPPTQ9NRN7 309 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 DDIT4Q9NX09 232 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 SIK3Q9Y2K2 1263 aa19.51■□□□□ 0.71
CDX1-202ENST00000616154 SMTNL1A8MU46 457 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 HSF2BPO75031 334 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 IL1BP01584 269 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 ABCB4P21439 1286 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 CCR1P32246 355 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 SCNN1AP37088 669 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 SNX16P57768 344 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 EFHC1Q5JVL4 640 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 FBXL22Q6P050 247 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 LUZP1Q86V48 1076 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 ZDHHC17Q8IUH5 632 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 PASD1Q8IV76 773 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 OR14C36Q8NHC7 312 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 FRS2Q8WU20 508 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 SPAG5Q96R06 1193 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 RBSNQ9H1K0 784 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 VPS16Q9H269 839 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 GDF3Q9NR23 364 aa19.5■□□□□ 0.71
CDX1-202ENST00000616154 URB1O60287 2271 aaKnown RBP19.5■□□□□ 0.71
CDX1-202ENST00000616154 DOCK9Q9BZ29 2069 aa19.49■□□□□ 0.71
CDX1-202ENST00000616154 LGALS16A8MUM7 142 aa19.49■□□□□ 0.71
CDX1-202ENST00000616154 PES1O00541 588 aaKnown RBP19.49■□□□□ 0.71
CDX1-202ENST00000616154 WNT9AO14904 365 aa19.49■□□□□ 0.71
CDX1-202ENST00000616154 YKT6O15498 198 aa19.49■□□□□ 0.71
CDX1-202ENST00000616154 LATO43561 262 aa19.49■□□□□ 0.71
CDX1-202ENST00000616154 LSM8O95777 96 aaKnown RBP19.49■□□□□ 0.71
CDX1-202ENST00000616154 ERBB2P04626 1255 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms