RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 RPL10LQ96L21 214 aaKnown RBP12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 CCDC114Q96M63 670 aa12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 TUBGCP2Q9BSJ2 902 aa12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 NEUROG2Q9H2A3 272 aa12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 ACP6Q9NPH0 428 aa12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 COX16Q9P0S2 106 aa12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 FNDC3AQ9Y2H6 1198 aaKnown RBP12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 SNX11Q9Y5W9 270 aa12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 URB1O60287 2271 aaKnown RBP12.51□□□□□ -0.41
PDLIM2-218ENST00000614502 DOCK4Q8N1I0 1966 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 ASXL3Q9C0F0 2248 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 BPTFQ12830 3046 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 C1QTNF3-AMACRE9PGA6 284 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 M0QYT0 321 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 FOXN3O00409 490 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 ALOX15BO15296 676 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 SLC7A4O43246 635 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 MAGEC1O60732 1142 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 IL1BP01584 269 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 IGHV4-34P06331 123 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 CLCN1P35523 988 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 CTSOP43234 321 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 PSMD8P48556 350 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 CDH4P55283 916 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 CCDC15Q0P6D6 951 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 NME3Q13232 169 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 AUHQ13825 339 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 TAF5Q15542 800 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 FBXL22Q6P050 247 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 NCEH1Q6PIU2 408 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 C19orf48Q6RUI8 117 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 SLCO6A1Q86UG4 719 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 PASD1Q8IV76 773 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 FAM71AQ8IYT1 594 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 STK40Q8N2I9 435 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 GALNT15Q8N3T1 639 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 OXR1Q8N573 874 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 BAHD1Q8TBE0 780 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 PGAP3Q96FM1 320 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 FAM129BQ96TA1 746 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 MTG2Q9H4K7 406 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 WDCPQ9H6R7 721 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 SIX2Q9NPC8 291 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 SAMSN1Q9NSI8 373 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 SLCO3A1Q9UIG8 710 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 COL5A1P20908 1838 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 KNTC1P50748 2209 aa12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 SMG1Q96Q15 3661 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-218ENST00000614502 PES1O00541 588 aaKnown RBP12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 TNFSF14O43557 240 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 ATP9BO43861 1147 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 GRAP2O75791 330 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 ERBB2P04626 1255 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 TPM2P07951 284 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 ZNF18P17022 549 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 MZF1P28698 734 aaPredicted RBP12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 CD38P28907 300 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 CDH5P33151 784 aaPredicted RBP12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 CTSKP43235 329 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 GABRB2P47870 512 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 PITX1P78337 314 aaPredicted RBP12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 TYRO3Q06418 890 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 RAPGEF1Q13905 1077 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 C5orf22Q49AR2 442 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 ACCSLQ4AC99 568 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 PTPN20Q4JDL3 420 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 LRRC31Q6UY01 552 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 PRPF39Q86UA1 669 aaKnown RBP12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 ERICH1Q86X53 443 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 MARCH9Q86YJ5 346 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 OR14C36Q8NHC7 312 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 C18orf8Q96DM3 657 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 AASDHPPTQ9NRN7 309 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 VPS28Q9UK41 221 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 VANGL2Q9ULK5 521 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 HS3ST4Q9Y661 456 aa12.49□□□□□ -0.41
PDLIM2-218ENST00000614502 TBC1D3DA0A087WVF3 549 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 TBC1D3IA0A087WXS9 549 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 TBC1D3EA0A087X179 549 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 TBC1D3KA0A087X1G2 549 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 A0A1B0GTQ1 180 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 TBC1D3FA6NER0 549 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 TBC1D3LB9A6J9 549 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 LSM8O95777 96 aaKnown RBP12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 TBC1D3HP0C7X1 549 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 CDK4P11802 303 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 CYP11B1P15538 503 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 EEF1GP26641 437 aaKnown RBP12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 ARRB1P49407 418 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 CXCR3P49682 368 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 STK19P49842 368 aaPredicted RBP12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 ADPRHP54922 357 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 APBA1Q02410 837 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 DEUP1Q05D60 604 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 OVGP1Q12889 678 aa12.48□□□□□ -0.41
PDLIM2-218ENST00000614502 DRAP1Q14919 205 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms