RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 MKS1Q9NXB0 559 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 MPP6Q9NZW5 540 aa14.39□□□□□ -0.11
PCDHGA3-202ENST00000612467 PHGDHO43175 533 aaKnown RBP14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 ZMPSTE24O75844 475 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 GLRBP48167 497 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 FKBP1BP68106 108 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 NAA25Q14CX7 972 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 RCN1Q15293 331 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 KCTD11Q693B1 232 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 GPR152Q8TDT2 470 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 FAM161BQ96MY7 647 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 TRMT13Q9NUP7 481 aaKnown RBP14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 TTC24A2A3L6 582 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 GP5P40197 560 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 PTDSS1P48651 473 aaKnown RBP14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 GPR15P49685 360 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 TUBB3Q13509 450 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 POU6F1Q14863 301 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 SMC1BQ8NDV3 1235 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 ZSCAN18Q8TBC5 510 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 NTAN1Q96AB6 310 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 ADAM2Q99965 735 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 SLC38A7Q9NVC3 462 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 THAP1Q9NVV9 213 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 CDH9Q9ULB4 789 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 WASF2Q9Y6W5 498 aa14.38□□□□□ -0.11
PCDHGA3-202ENST00000612467 GLRA3O75311 464 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 FBXO21O94952 628 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 PGM1P36871 562 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 CXCR3P49682 368 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 THOC5Q13769 683 aaKnown RBP14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 IPMKQ8NFU5 416 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 NRG4Q8WWG1 115 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 RBBP8Q99708 897 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 MTG1Q9BT17 334 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 CCDC106Q9BWC9 280 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 GBA3Q9H227 469 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 LRRC40Q9H9A6 602 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 CASS4Q9NQ75 786 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 COPG2Q9UBF2 871 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 TOMM70O94826 608 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 SLC25A3Q00325 362 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 GALNT2Q10471 571 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 SCAPQ12770 1279 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 TAF11Q15544 211 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 ZNF280DQ6N043 979 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 KCNMB4Q86W47 210 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 DENND6AQ8IWF6 608 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 CASP10Q92851 521 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 FERMT1Q9BQL6 677 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 THTPAQ9BU02 230 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 FTHL17Q9BXU8 183 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 WWP1Q9H0M0 922 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 NMUR1Q9HB89 426 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 SLC2A6Q9UGQ3 507 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 SLC39A10Q9ULF5 831 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 G3BP2Q9UN86 482 aaKnown RBP14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 NEU3Q9UQ49 428 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 SCN10AQ9Y5Y9 1956 aa14.37□□□□□ -0.11
PCDHGA3-202ENST00000612467 A0A096LPK6 155 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 UNCXA6NJT0 531 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 WFS1O76024 890 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 IL1BP01584 269 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 CHRNA4P43681 627 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 ARL13BQ3SXY8 428 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 C14orf80Q86SX3 495 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 TMEM135Q86UB9 458 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 IFNL1Q8IU54 200 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 SCN4BQ8IWT1 228 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 TMEM86AQ8N2M4 240 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 ZNF781Q8N8C0 355 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 PIWIL2Q8TC59 973 aaKnown RBP14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 EPAS1Q99814 870 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 DNAI2Q9GZS0 605 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 ZNF236Q9UL36 1845 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 MYLKQ15746 1914 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 C9IYK1 514 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 TK2O00142 265 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 BIRC5O15392 142 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 DUSP11O75319 330 aaKnown RBP14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 SKAP2O75563 359 aaPredicted RBP14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 ASGR1P07306 291 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 RALBP11234 206 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 ABL2P42684 1182 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 GJA9P57773 515 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 MXRA7P84157 204 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 MPP1Q00013 466 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 MGAT3Q09327 533 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 CTBP1Q13363 440 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 GRM3Q14832 879 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 KRT72Q14CN4 511 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 SPANXN3Q5MJ09 141 aa14.36□□□□□ -0.11
PCDHGA3-202ENST00000612467 SERINC5Q86VE9 423 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms