RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ITPKAP23677 461 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 MZF1P28698 734 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 RFC1P35251 1148 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 ADRA1BP35368 520 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 GEMIN4P57678 1058 aaKnown RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 RPS14P62263 151 aaKnown RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 ZBED6P86452 979 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 TRIM14Q14142 442 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 CCDC14Q49A88 953 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 OTUD1Q5VV17 481 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 CXorf57Q6NSI4 855 aaKnown RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 TFAP2DQ7Z6R9 452 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 FRMD1Q8N878 549 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 DCAF4L2Q8NA75 395 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 ATP11CQ8NB49 1132 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 JOSD2Q8TAC2 188 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 SNX19Q92543 992 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 SYN2Q92777 582 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 NTAN1Q96AB6 310 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 ZNF419Q96HQ0 510 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 LMLNQ96KR4 655 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 EPAS1Q99814 870 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 MIR1-1HGQ9H1L0 117 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 OSBPL2Q9H1P3 480 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 RSPH9Q9H1X1 276 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 DYRK4Q9NR20 520 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 PILRBQ9UKJ0 227 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 TPX2Q9ULW0 747 aaKnown RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 USP34Q70CQ2 3546 aa12.66□□□□□ -0.38
CBWD3-208ENST00000612050 ATXN2Q99700 1313 aaKnown RBP12.66□□□□□ -0.38
CBWD3-208ENST00000612050 MUC22E2RYF6 1773 aaPredicted RBP12.65□□□□□ -0.38
CBWD3-208ENST00000612050 ILVBLA1L0T0 632 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 LRRC72A6NJI9 287 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 DRGXA6NNA5 263 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 TTC34A8MYJ7 566 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 SEMA4FO95754 770 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 IL1BP01584 269 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 C5AR1P21730 350 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 RRM1P23921 792 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 MAPKAPK2P49137 400 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 CLCN6P51797 869 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 ATXN1P54253 815 aaKnown RBP12.65□□□□□ -0.38
CBWD3-208ENST00000612050 NRG1Q02297 640 aaPredicted RBP12.65□□□□□ -0.38
CBWD3-208ENST00000612050 SLC20A2Q08357 652 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 PTP4A2Q12974 167 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 NFKBIBQ15653 356 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 CST6Q15828 149 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 STPG1Q5TH74 334 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 SLC23A3Q6PIS1 610 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 C14orf80Q86SX3 495 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 ZNF354CQ86Y25 554 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 MMAAQ8IVH4 418 aaKnown RBP12.65□□□□□ -0.38
CBWD3-208ENST00000612050 HDDC3Q8N4P3 179 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 CPLX3Q8WVH0 158 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 SKA1Q96BD8 255 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 ZNF653Q96CK0 615 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 TBC1D31Q96DN5 1066 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 MRGPRX3Q96LB0 322 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 ANP32EQ9BTT0 268 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 SPON2Q9BUD6 331 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 PABPC3Q9H361 631 aaKnown RBP12.65□□□□□ -0.38
CBWD3-208ENST00000612050 SMOC1Q9H4F8 434 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 CATSPERBQ9H7T0 1116 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 ATP13A1Q9HD20 1204 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 FBXL12Q9NXK8 326 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 MPP6Q9NZW5 540 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 ABCA7Q8IZY2 2146 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 MYO15AQ9UKN7 3530 aa12.65□□□□□ -0.38
CBWD3-208ENST00000612050 IGLV3-10A0A075B6K4 115 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 A0A1B0GTW7 788 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 EIF3CLB5ME19 914 aaKnown RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 CBX4O00257 560 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 ALOX15BO15296 676 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 CCP110O43303 1012 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 BNIP3LO60238 219 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 RNASEH2AO75792 299 aaKnown RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 CNTN5O94779 1100 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 FTLP02792 175 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 SERPING1P05155 500 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 PLEKP08567 350 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 SERPINF2P08697 491 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 RHOQP17081 205 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 PSMA2P25787 234 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 SLC8A1P32418 973 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 CTSOP43234 321 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 PSMD8P48556 350 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 STK19P49842 368 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 TEAD4Q15561 434 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 ALFQ53S48 1182 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 DCAF12L1Q5VU92 463 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 TMC6Q7Z403 805 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 BNIPLQ7Z465 357 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 DRC7Q8IY82 874 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 CENPIQ92674 756 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 EIF3CQ99613 913 aaKnown RBP12.64□□□□□ -0.39
CBWD3-208ENST00000612050 ZDHHC5Q9C0B5 715 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
CBWD3-208ENST00000612050 CNOT8Q9UFF9 292 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms