RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 PPM1JQ5JR12 505 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SH2D4BQ5SQS7 431 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 AGAP9Q5VTM2 703 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 NCBP2-AS2Q69YL0 99 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 TLDC1Q6P9B6 456 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 POTEHQ6S545 545 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 MARK2Q7KZI7 788 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 TFAP2DQ7Z6R9 452 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 KYQ8NBH2 561 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 BLOC1S5Q8TDH9 187 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 TEKT5Q96M29 485 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 MRPL1Q9BYD6 325 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 UGT1A7Q9HAW7 530 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 UGT1A10Q9HAW8 530 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 UGT1A8Q9HAW9 530 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CDHR5Q9HBB8 845 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 EIF2B3Q9NR50 452 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 XPR1Q9UBH6 696 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CDYLQ9Y232 598 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 RAD54BQ9Y620 910 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 FAM159BA6NKW6 160 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 PIRO00625 290 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CLGNO14967 610 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CNMDO75829 334 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SERPINB5P36952 375 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CCDC142Q17RM4 750 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 ZNF280DQ6N043 979 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SNX32Q86XE0 403 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 TMA16Q96EY4 203 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 NT5MQ9NPB1 228 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 VPS45Q9NRW7 570 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CNTN3Q9P232 1028 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 HEATR9A2RTY3 570 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 ZNF487B1APH4 448 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 WFS1O76024 890 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 PDE5AO76074 875 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 MT-CO1P00395 513 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CCNB1P14635 433 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 PTPN3P26045 913 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 ABCE1P61221 599 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 KHDC1Q4VXA5 237 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 TMEM130Q8N3G9 435 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CXorf38Q8TB03 319 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 FBXO32Q969P5 355 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CYP4F12Q9HCS2 524 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 VCX3AQ9NNX9 186 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 MRPL40Q9NQ50 206 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 ENTPD7Q9NQZ7 604 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 STX18Q9P2W9 335 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 MCM8Q9UJA3 840 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 FAM95CA0A1B0GW59 222 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 SLC12A8A0AV02 714 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 KIF3CO14782 793 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 FGF10O15520 208 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 RAMP2O60895 175 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 MPOP05164 745 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 AVPR1AP37288 418 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TBL3Q12788 808 aaKnown RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 KRT72Q14CN4 511 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 KIF19Q2TAC6 998 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 HFE2Q6ZVN8 426 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 ARHGAP18Q8N392 663 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 SLC7A6OSQ96CW6 309 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 RTP4Q96DX8 246 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 STN1Q9H668 368 aaKnown RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 ZNF395Q9H8N7 513 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 ABCC13Q9NSE7 274 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 EURLQ9NYK6 297 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TMEM216Q9P0N5 145 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 LAMA4Q16363 1823 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 C2orf71A6NGG8 1288 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 UNCXA6NJT0 531 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 SPTLC1O15269 473 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 IL4RP24394 825 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 ETV4P43268 484 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 WNT3AP56704 352 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 SLC12A1Q13621 1099 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 ZNF618Q5T7W0 954 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 IRGCQ6NXR0 463 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TMEM154Q6P9G4 183 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 C16orf89Q6UX73 402 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 BNC2Q6ZN30 1099 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 TAC4Q86UU9 113 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.49□□□□□ -1.37
SNX13-213ENST00000611725 RNF148Q8N7C7 305 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 ATP6V0D2Q8N8Y2 350 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 CCDC126Q96EE4 140 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 CAB39LQ9H9S4 337 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 SLC24A3Q9HC58 644 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 COPG2Q9UBF2 871 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 RUVBL2Q9Y230 463 aaKnown RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 PSAT1Q9Y617 370 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 RFPL1O75677 317 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 SERPINF2P08697 491 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 FAM163BP0C2L3 166 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 TCN1P20061 433 aaPredicted RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 WARSP23381 471 aaKnown RBP6.49□□□□□ -1.37
SNX13-213ENST00000611725 FCGRTP55899 365 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 CTBP1Q13363 440 aa6.49□□□□□ -1.37
SNX13-213ENST00000611725 LAMB3Q13751 1172 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms