RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 PABPC3Q9H361 631 aaKnown RBP3.94□□□□□ -1.78
TARDBP-212ENST00000611008 ITM2CQ9NQX7 267 aa3.94□□□□□ -1.78
TARDBP-212ENST00000611008 KIF17Q9P2E2 1029 aa3.94□□□□□ -1.78
TARDBP-212ENST00000611008 FZD4Q9ULV1 537 aa3.94□□□□□ -1.78
TARDBP-212ENST00000611008 SLC12A4Q9UP95 1085 aa3.94□□□□□ -1.78
TARDBP-212ENST00000611008 CNTN6Q9UQ52 1028 aa3.94□□□□□ -1.78
TARDBP-212ENST00000611008 UBE2J1Q9Y385 318 aaPredicted RBP3.94□□□□□ -1.78
TARDBP-212ENST00000611008 PCDHGB1Q9Y5G3 927 aa3.94□□□□□ -1.78
TARDBP-212ENST00000611008 LARGE1O95461 756 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 RPS6KB1P23443 525 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 HOXA7P31268 230 aaPredicted RBP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 GRK5P34947 590 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 AARSP49588 968 aaKnown RBP eCLIP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 FOXO1Q12778 655 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 ADCK5Q3MIX3 580 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 HIST2H2BCQ6DN03 193 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 LIN54Q6MZP7 749 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 TRILQ7L0X0 811 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 RTL10Q7L3V2 364 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 SMAP1Q8IYB5 467 aaPredicted RBP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 OR52L2PQ8NGH6 319 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 STT3BQ8TCJ2 826 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 OTUD7AQ8TE49 926 aaPredicted RBP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 MSI2Q96DH6 328 aaKnown RBP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 MLXIPLQ9NP71 852 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 SAYSD1Q9NPB0 183 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 ABHD10Q9NUJ1 306 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 LIN7CQ9NUP9 197 aaKnown RBP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 HIF1ANQ9NWT6 349 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 SRP68Q9UHB9 627 aaKnown RBP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 BAG5Q9UL15 447 aa3.93□□□□□ -1.78
TARDBP-212ENST00000611008 TRPC5Q9UL62 973 aaPredicted RBP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 C19orf53Q9UNZ5 99 aaPredicted RBP3.93□□□□□ -1.78
TARDBP-212ENST00000611008 E7EVH7 732 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 H0Y3Z8 333 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 H0YGN5 161 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 M0QZQ0 153 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 PRPF4O43172 522 aaKnown RBP eCLIP3.92□□□□□ -1.78
TARDBP-212ENST00000611008 RXRAP19793 462 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 SERPINA4P29622 427 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 RBM5P52756 815 aaKnown RBP eCLIP3.92□□□□□ -1.78
TARDBP-212ENST00000611008 PRKAA2P54646 552 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 WDR5P61964 334 aaKnown RBP3.92□□□□□ -1.78
TARDBP-212ENST00000611008 PDCLQ13371 301 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 CUL4BQ13620 913 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 TAF12Q16514 161 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 AAK1Q2M2I8 961 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 WASHC2DQ5SRD0 308 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 WDR93Q6P2C0 686 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 C16orf89Q6UX73 402 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 SYT13Q7L8C5 426 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 FTSJ3Q8IY81 847 aaKnown RBP3.92□□□□□ -1.78
TARDBP-212ENST00000611008 OR6Y1Q8NGX8 325 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 LPAR1Q92633 364 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 AKAP1Q92667 903 aaKnown RBP eCLIP3.92□□□□□ -1.78
TARDBP-212ENST00000611008 RSC1A1Q92681 617 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 WBP2Q969T9 261 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 ZSCAN31Q96LW9 406 aaPredicted RBP3.92□□□□□ -1.78
TARDBP-212ENST00000611008 ELOVL1Q9BW60 279 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 CHODLQ9H9P2 273 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 PRDM16Q9HAZ2 1276 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 PRDM8Q9NQV8 689 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 LUZP4Q9P127 313 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 DAPP1Q9UN19 280 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 PCDHA10Q9Y5I2 948 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 DGKBQ9Y6T7 804 aa3.92□□□□□ -1.78
TARDBP-212ENST00000611008 FAM90A18PA6NE21 464 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 FAM90A16PA6NEW6 464 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 AGAP5A6NIR3 686 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 FAM90A9PA6NNJ1 464 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 FAM90A5PA8MXJ8 464 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 DHHO43323 396 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 UGDHO60701 494 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 ATG13O75143 517 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 FAM90A15PP0C7V4 464 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 FAM90A14PP0C7W9 464 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 PKMP14618 531 aaKnown RBP3.91□□□□□ -1.78
TARDBP-212ENST00000611008 VEGFAP15692 232 aaPredicted RBP3.91□□□□□ -1.78
TARDBP-212ENST00000611008 MATN1P21941 496 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 DUSP1P28562 367 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 SLC8A1P32418 973 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 MAPK9P45984 424 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 CCT5P48643 541 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 AGTR2P50052 363 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 ARL4CP56559 192 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 RBM6P78332 1123 aaKnown RBP3.91□□□□□ -1.78
TARDBP-212ENST00000611008 PPFIA1Q13136 1202 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 MTA1Q13330 715 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 MRGPRG-AS1Q2M3A8 158 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 HSP90AB4PQ58FF6 505 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 TANGO2Q6ICL3 276 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 KYAT3Q6YP21 454 aaKnown RBP3.91□□□□□ -1.78
TARDBP-212ENST00000611008 MOGAT3Q86VF5 341 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 C2CD5Q86YS7 1000 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 ANKRD18AQ8IVF6 992 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 SUGP1Q8IWZ8 645 aaKnown RBP3.91□□□□□ -1.78
TARDBP-212ENST00000611008 ADGRF4Q8IZF3 695 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 SRFBP1Q8NEF9 429 aaKnown RBP3.91□□□□□ -1.78
TARDBP-212ENST00000611008 GLMPQ8WWB7 406 aa3.91□□□□□ -1.78
TARDBP-212ENST00000611008 PPM1EQ8WY54 764 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms