RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 SFMBT1Q9UHJ3 866 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 CPSF3Q9UKF6 684 aaKnown RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 LRP5O75197 1615 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 C2CD4BA6NLJ0 364 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 H3BSA7 217 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 ZBTB24O43167 697 aaPredicted RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 SLC26A4O43511 780 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 PRKCGP05129 697 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 VAV1P15498 845 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 GGT5P36269 586 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 ARL2P36404 184 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 RAB27AP51159 221 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 ABCE1P61221 599 aaKnown RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 ROR2Q01974 943 aaKnown RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 TAP1Q03518 808 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 PLCL1Q15111 1095 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 NEDD8Q15843 81 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 PLA2G4EQ3MJ16 856 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 NAPRTQ6XQN6 538 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 ACAD11Q709F0 780 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 MIB1Q86YT6 1006 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 IFNLR1Q8IU57 520 aaPredicted RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 DNAJB3Q8WWF6 145 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 EZH1Q92800 747 aaPredicted RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 TMEM79Q9BSE2 394 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 TIPINQ9BVW5 301 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 GATA5Q9BWX5 397 aaPredicted RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 SLC4A5Q9BY07 1137 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 ILKAPQ9H0C8 392 aaPredicted RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 USP29Q9HBJ7 922 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 FBRSL1Q9HCM7 1045 aaKnown RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 TXNRD2Q9NNW7 524 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 MPP6Q9NZW5 540 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 XPR1Q9UBH6 696 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 ZNF212Q9UDV6 495 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 WARS2Q9UGM6 360 aaKnown RBP6.61□□□□□ -1.35
RPF2-204ENST00000607388 PTGDR2Q9Y5Y4 395 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 AP4B1Q9Y6B7 739 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 CDH23Q9H251 3354 aa6.61□□□□□ -1.35
RPF2-204ENST00000607388 C10orf71Q711Q0 1435 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 A0A0U1RQS6 177 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 OR51F1A6NGY5 319 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 A6NHS1 94 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 MSI1O43347 362 aaKnown RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 PLIN3O60664 434 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 RECQL4O94761 1208 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 LYPLA2O95372 231 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 LSM8O95777 96 aaKnown RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 SERPINE1P05121 402 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 ERCC2P18074 760 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 NMBRP28336 390 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 ADSLP30566 484 aaPredicted RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 EPHX2P34913 555 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 TKTL1P51854 596 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 BEX3Q00994 111 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 SLC6A3Q01959 620 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 KLF10Q13118 480 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 ATP1A4Q13733 1029 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 LAMC2Q13753 1193 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 PTK2BQ14289 1009 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 GRM3Q14832 879 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 C16orf72Q14CZ0 275 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 SGO1Q5FBB7 561 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 RARS2Q5T160 578 aaKnown RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 TEDDM1Q5T9Z0 273 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 WSCD1Q658N2 575 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 FSTL4Q6MZW2 842 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 C15orf39Q6ZRI6 1047 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 MARK2Q7KZI7 788 aaKnown RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 ARHGAP22Q7Z5H3 698 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 OR52K2Q8NGK3 314 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 GABPB2Q8TAK5 448 aaPredicted RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 PPP2R3CQ969Q6 453 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 NXNL1Q96CM4 212 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 NOL11Q9H8H0 719 aaKnown RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 NMRAL1Q9HBL8 299 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 CYLDQ9NQC7 956 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 GALNT8Q9NY28 637 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.6□□□□□ -1.35
RPF2-204ENST00000607388 WDR35Q9P2L0 1181 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 GNEQ9Y223 722 aaKnown RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 BTRCQ9Y297 605 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 SCN9AQ15858 1988 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 MEIS3P2A8K0S8 358 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 A8MX80 341 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 H3BRB1 525 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 NR5A2O00482 541 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 GIPC1O14908 333 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 GLRA3O75311 464 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 CILPO75339 1184 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 SH3BGRLO75368 114 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 BEST1O76090 585 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 KLHL2O95198 593 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 ZBTB11O95625 1053 aaPredicted RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 SPRP35270 261 aaPredicted RBP6.6□□□□□ -1.35
RPF2-204ENST00000607388 ETV4P43268 484 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 CCR3P51677 355 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 BCAT1P54687 386 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 ACTR3P61158 418 aa6.6□□□□□ -1.35
RPF2-204ENST00000607388 LSM3P62310 102 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms