RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 RPL10LQ96L21 214 aaKnown RBP18.33■□□□□ 0.52
CCDC12-212ENST00000605358 KREMEN1Q96MU8 473 aa18.33■□□□□ 0.52
CCDC12-212ENST00000605358 UBL7Q96S82 380 aaPredicted RBP18.33■□□□□ 0.52
CCDC12-212ENST00000605358 PRMT1Q99873 361 aaKnown RBP18.33■□□□□ 0.52
CCDC12-212ENST00000605358 TMEM51Q9NW97 253 aa18.33■□□□□ 0.52
CCDC12-212ENST00000605358 ARHGAP20Q9P2F6 1191 aa18.33■□□□□ 0.52
CCDC12-212ENST00000605358 ARID1BQ8NFD5 2236 aaPredicted RBP18.33■□□□□ 0.52
CCDC12-212ENST00000605358 SMG1Q96Q15 3661 aaKnown RBP18.32■□□□□ 0.52
CCDC12-212ENST00000605358 PLK4O00444 970 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 PLRG1O43660 514 aaKnown RBP18.32■□□□□ 0.52
CCDC12-212ENST00000605358 ATP9BO43861 1147 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 AFPP02771 609 aaKnown RBP18.32■□□□□ 0.52
CCDC12-212ENST00000605358 CKMT2P17540 419 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 DRD3P35462 400 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 SNX16P57768 344 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 CDK17Q00537 523 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 EFHC1Q5JVL4 640 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 PRAMEF14Q5SWL7 426 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 NEK5Q6P3R8 708 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 FBXL19Q6PCT2 694 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.32■□□□□ 0.52
CCDC12-212ENST00000605358 LRRC69Q6ZNQ3 347 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 MARCH9Q86YJ5 346 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 ARHGEF19Q8IW93 802 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 EID2Q8N6I1 236 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 LSM14AQ8ND56 463 aaKnown RBP18.32■□□□□ 0.52
CCDC12-212ENST00000605358 RFFLQ8WZ73 363 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 CYTH4Q9UIA0 394 aa18.32■□□□□ 0.52
CCDC12-212ENST00000605358 XPO7Q9UIA9 1087 aaKnown RBP18.32■□□□□ 0.52
CCDC12-212ENST00000605358 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCDC12-212ENST00000605358 E5RJQ4 531 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 C1QTNF3-AMACRE9PGA6 284 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 PRAMEF26H0Y7S4 382 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 MCF2LO15068 1137 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 RRP8O43159 456 aaKnown RBP18.31■□□□□ 0.52
CCDC12-212ENST00000605358 FGFR1OPO95684 399 aaKnown RBP18.31■□□□□ 0.52
CCDC12-212ENST00000605358 KRT5P13647 590 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 EIF2S3P41091 472 aaKnown RBP18.31■□□□□ 0.52
CCDC12-212ENST00000605358 E2F1Q01094 437 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 STAT4Q14765 748 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 SETMARQ53H47 684 aaPredicted RBP18.31■□□□□ 0.52
CCDC12-212ENST00000605358 DENND1BQ6P3S1 775 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 KANSL1Q7Z3B3 1105 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 PREBQ9HCU5 417 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 SLC25A13Q9UJS0 675 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 PPM1HQ9ULR3 514 aa18.31■□□□□ 0.52
CCDC12-212ENST00000605358 PPP1R3GB7ZBB8 358 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 WNT9AO14904 365 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 LETM1O95202 739 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 CD44P16070 742 aaKnown RBP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 PDGFRAP16234 1089 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 ACP1P24666 158 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 STK19P49842 368 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 TARDBPQ13148 414 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 DNAJC3Q13217 504 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 ACBD5Q5T8D3 534 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 CXorf57Q6NSI4 855 aaKnown RBP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 FAM174AQ8TBP5 190 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 NELFBQ8WX92 580 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 BAP1Q92560 729 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 ALG14Q96F25 216 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 SLC2A13Q96QE2 648 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 FEM1AQ9BSK4 669 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 INTS2Q9H0H0 1204 aaKnown RBP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 UBE2TQ9NPD8 197 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 MAN1B1Q9UKM7 699 aa18.3■□□□□ 0.52
CCDC12-212ENST00000605358 FARP1Q9Y4F1 1045 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-212ENST00000605358 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.29■□□□□ 0.52
CCDC12-212ENST00000605358 THAP12O43422 761 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 HSF2BPO75031 334 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 CLDN11O75508 207 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 CALCAP01258 141 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 GNA15P30679 374 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 PPP2CBP62714 309 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 PPP2CAP67775 309 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 BNIP3Q12983 259 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 ZNF177Q13360 481 aaPredicted RBP18.29■□□□□ 0.52
CCDC12-212ENST00000605358 PDCLQ13371 301 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 C5orf22Q49AR2 442 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 HES3Q5TGS1 186 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 FBXL22Q6P050 247 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 SPATS2Q86XZ4 545 aaKnown RBP18.29■□□□□ 0.52
CCDC12-212ENST00000605358 SNIP1Q8TAD8 396 aaKnown RBP18.29■□□□□ 0.52
CCDC12-212ENST00000605358 RNF34Q969K3 372 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 BBC3Q96PG8 261 aaPredicted RBP18.29■□□□□ 0.52
CCDC12-212ENST00000605358 NOX5Q96PH1 765 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 FAM204AQ9H8W3 233 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 DDIT4Q9NX09 232 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 TBC1D30Q9Y2I9 924 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 AK5Q9Y6K8 562 aa18.29■□□□□ 0.52
CCDC12-212ENST00000605358 GCN1Q92616 2671 aaKnown RBP18.28■□□□□ 0.52
CCDC12-212ENST00000605358 SHROOM3Q8TF72 1996 aa18.28■□□□□ 0.52
CCDC12-212ENST00000605358 MYLKQ15746 1914 aa18.28■□□□□ 0.52
CCDC12-212ENST00000605358 RTN2O75298 545 aa18.28■□□□□ 0.52
CCDC12-212ENST00000605358 ZNF18P17022 549 aa18.28■□□□□ 0.52
CCDC12-212ENST00000605358 ZNF211Q13398 564 aaPredicted RBP18.28■□□□□ 0.52
CCDC12-212ENST00000605358 MORC3Q14149 939 aa18.28■□□□□ 0.52
CCDC12-212ENST00000605358 DLG2Q15700 870 aa18.28■□□□□ 0.52
CCDC12-212ENST00000605358 ACCSLQ4AC99 568 aa18.28■□□□□ 0.52
CCDC12-212ENST00000605358 HS1BP3Q53T59 392 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms