RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 LCP1P13796 627 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TGM2P21980 687 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 DUSP3P51452 185 aaPredicted RBP12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 DAOAP59103 153 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 BST2Q10589 180 aaKnown RBP12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CNTN1Q12860 1018 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 C8orf34Q49A92 452 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 DSG4Q86SJ6 1040 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 APCDD1Q8J025 514 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TTC39CQ8N584 583 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 OR13H1Q8NG92 308 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 UBA3Q8TBC4 463 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ARRDC3Q96B67 414 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 DDX50Q9BQ39 737 aaKnown RBP12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 USP29Q9HBJ7 922 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 EVA1BQ9NVM1 165 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 HESX1Q9UBX0 185 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SARDHQ9UL12 918 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 USP9YO00507 2555 aaPredicted RBP12.15□□□□□ -0.47
PDLIM1P1-201ENST00000604187 K7ESM1 405 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 RNGTTO60942 597 aaKnown RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NEBLO76041 1014 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MOCS2O96007 188 aaPredicted RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 KRT13P13646 458 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PDIA4P13667 645 aaKnown RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NNMTP40261 264 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CDKN3Q16667 212 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ARL13BQ3SXY8 428 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 LINC00303Q3SY05 128 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 DCAF6Q58WW2 860 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZNF542PQ5EBM4 170 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MS4A13Q5J8X5 152 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FAM46CQ5VWP2 391 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CRTC1Q6UUV9 634 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZNF574Q6ZN55 896 aaPredicted RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 INTS8Q75QN2 995 aaKnown RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ARL14Q8N4G2 192 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FRS2Q8WU20 508 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SEMA4DQ92854 862 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 KLK6Q92876 244 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PRR11Q96HE9 360 aaPredicted RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FCRL2Q96LA5 508 aaPredicted RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CCNL2Q96S94 520 aaPredicted RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ARHGAP9Q9BRR9 750 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PREBQ9HCU5 417 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FZD3Q9NPG1 666 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CNGB3Q9NQW8 809 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 STARD5Q9NSY2 213 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PPP4R2Q9NY27 417 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MTMR6Q9Y217 621 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PCDHGA8Q9Y5G5 932 aa12.14□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CPED1A4D0V7 1026 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NEMP2A6NFY4 417 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CDRT15L2A8MXV6 281 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PIK3R2O00459 728 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SCAMP1O15126 338 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 KLRC4O43908 158 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CUTAO60888 179 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PPP6R2O75170 966 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TNFSF15O95150 251 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FAM87AP0C7U9 286 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CD19P15391 556 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 RGS7P49802 495 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CLDN2P57739 230 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 TAS2R38P59533 333 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZNF177Q13360 481 aaPredicted RBP12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 GUSBP11Q6P575 273 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 RBM44Q6ZP01 1051 aaKnown RBP12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 EFL1Q7Z2Z2 1120 aaKnown RBP12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CLEC14AQ86T13 490 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 FAM186BQ8IYM0 893 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SLC22A18ASQ8N1D0 253 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SCML4Q8N228 414 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ZNF548Q8NEK5 533 aaPredicted RBP12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 KCTD13Q8WZ19 329 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 OR8D1Q8WZ84 308 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 GRAMD1AQ96CP6 724 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NOX5Q96PH1 765 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 DUSP23Q9BVJ7 150 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 DNAJC28Q9NX36 388 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ANKMY1Q9P2S6 941 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ATXN7L1Q9ULK2 861 aaPredicted RBP12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 ENTPD2Q9Y5L3 495 aa12.13□□□□□ -0.47
PDLIM1P1-201ENST00000604187 C1QTNF3-AMACRE9PGA6 284 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MAPK13O15264 365 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 EFSO43281 561 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SUV39H1O43463 412 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 CALUO43852 315 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 LTFP02788 710 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 PDGFRAP16234 1089 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 NR2F2P24468 414 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 AKT2P31751 481 aa12.12□□□□□ -0.47
PDLIM1P1-201ENST00000604187 MXI1P50539 228 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms