RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 PXNP49023 591 aaPredicted RBP16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 MRE11P49959 708 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 NAP1L1P55209 391 aaKnown RBP16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 SEMA3BQ13214 749 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 BYSLQ13895 437 aaKnown RBP16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 KRT81Q14533 505 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 POLD3Q15054 466 aaPredicted RBP16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 TCEAL1Q15170 157 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 PTPRNQ16849 979 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 KCNT1Q5JUK3 1230 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 RETSATQ6NUM9 610 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 RAD9BQ6WBX8 426 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 NLRP14Q86W24 1093 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 ZNF354CQ86Y25 554 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 DCAF4L2Q8NA75 395 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 CCDC112Q8NEF3 446 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 NELL1Q92832 810 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 ALG14Q96F25 216 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 RPL10LQ96L21 214 aaKnown RBP16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 KCTD15Q96SI1 283 aaPredicted RBP16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 MAGEH1Q9H213 219 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 TMEM245Q9H330 911 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 SEMA4AQ9H3S1 761 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 FBRSQ9HAH7 460 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 ATP13A1Q9HD20 1204 aa16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.42■□□□□ 0.22
PPFIA3-213ENST00000602905 SPAG17Q6Q759 2223 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 EML5Q05BV3 1969 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 A0A0A6YYK5 440 aaPredicted RBP16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 A0A1W2PQF6 199 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 WASH4PA8MWX3 477 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 RARAP10276 462 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 HLA-EP13747 358 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 IL1R2P27930 398 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 SLC1A1P43005 524 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 CTSOP43234 321 aaPredicted RBP16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 HCAR3P49019 387 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 NUMBP49757 651 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 NHLH1Q02575 133 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 SLC25A11Q02978 314 aaKnown RBP16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 DPYSL2Q16555 572 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 CA9Q16790 459 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 ACCSLQ4AC99 568 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 USP39Q53GS9 565 aaKnown RBP16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 ODF2Q5BJF6 829 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 RFX8Q6ZV50 586 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 CYP4V2Q6ZWL3 525 aaPredicted RBP16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 RASSF3Q86WH2 238 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 MAP7D3Q8IWC1 876 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 ZBTB44Q8NCP5 570 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 OR52K2Q8NGK3 314 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 FAM86C1Q9NVL1 165 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 ZNF212Q9UDV6 495 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 OR51B4Q9Y5P0 310 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 R4GN57 208 aa16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 MUC22E2RYF6 1773 aaPredicted RBP16.41■□□□□ 0.22
PPFIA3-213ENST00000602905 A0A0D9SEW6 157 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 EDDM13A0A1B0GTR0 161 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 TARSL2A2RTX5 802 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 CBX4O00257 560 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 RNASEH1O60930 286 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 GOT1P17174 413 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 HADHBP55084 474 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 CDH6P55285 790 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 GEMIN4P57678 1058 aaKnown RBP16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 YBEYP58557 167 aaPredicted RBP16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 SLC20A2Q08357 652 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 DMWDQ09019 674 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 ARTNQ5T4W7 220 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 KIAA1211LQ6NV74 962 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 CEP68Q76N32 757 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 ATP11CQ8NB49 1132 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 KCTD6Q8NC69 237 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 MDGA1Q8NFP4 955 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 OR7D4Q8NG98 312 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 OR2T3Q8NH03 318 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 ERLEC1Q96DZ1 483 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 SPACA7Q96KW9 195 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 MRGPRX3Q96LB0 322 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 TPSD1Q9BZJ3 242 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 VPS51Q9UID3 782 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 RAB23Q9ULC3 237 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 NEU3Q9UQ49 428 aa16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
PPFIA3-213ENST00000602905 SPOPO43791 374 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 SNAP91O60641 907 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 RPP40O75818 363 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 ACADMP11310 421 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 TCF4P15884 667 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 GABRG2P18507 467 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 NBL1P41271 181 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 STK19P49842 368 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 VAV2P52735 878 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 NDST2P52849 883 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 CAMK2GQ13555 558 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 PDK2Q15119 407 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 HNRNPA1L2Q32P51 320 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 PARP15Q460N3 678 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 KIAA1324Q6UXG2 1013 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms