RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TRAV20A0A0B4J274 112 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 PQLC2LA1A4F0 135 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CCDC78A2IDD5 438 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 LINC00862A6NCI5 91 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CENPXA8MT69 81 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 BTNL10A8MVZ5 291 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 LINC00587B1AMM8 73 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 RBAK-RBAKDNI3L0D1 243 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 PGRMC1O00264 195 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CTDSP2O14595 271 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 SLC7A4O43246 635 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 NOL3O60936 208 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 LRRN2O75325 713 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 BCAS1O75363 584 aaPredicted RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GOT2P00505 430 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 KRT1P04264 644 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GLAP06280 429 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GABRB3P28472 473 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 FOXN2P32314 431 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 HTR2BP41595 481 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GNPDA1P46926 289 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 ALDH1A3P47895 512 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 PCP4P48539 62 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 DNM2P50570 870 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 RNF144AP50876 292 aaPredicted RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 KLRC3Q07444 240 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TEX30Q5JUR7 227 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 EFHC1Q5JVL4 640 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 RARS2Q5T160 578 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 ATF7IP2Q5U623 682 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 LPCAT4Q643R3 524 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 ALG1LQ6GMV1 187 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 PM20D1Q6GTS8 502 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CENPUQ71F23 418 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TRMT10CQ7L0Y3 403 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TLK2Q86UE8 772 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 HORMAD1Q86X24 394 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 MIB1Q86YT6 1006 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CHERPQ8IWX8 916 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 RASGEF1CQ8N431 466 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 PPHLN1Q8NEY8 458 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TMIGD2Q96BF3 282 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CITED4Q96RK1 184 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 DCUN1D5Q9BTE7 237 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CHID1Q9BWS9 393 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 AP1M1Q9BXS5 423 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 SLC19A3Q9BZV2 496 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 PPCSQ9HAB8 311 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 AKIP1Q9NQ31 210 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 PNPLA3Q9NST1 481 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 SRRDQ9UH36 339 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 NARFQ9UHQ1 456 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 MYRFQ9Y2G1 1151 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 SNX24Q9Y343 169 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 ATP8B3O60423 1300 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 A0A0X1KG70 313 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 PMS2P1A4D2B8 440 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GIPC1O14908 333 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 SPOPO43791 374 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 NDUFS6O75380 124 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 POLR2MP0CAP2 368 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 SRCP12931 536 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CYP11B1P15538 503 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TIMP2P16035 220 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TMEM11P17152 192 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 DDOSTP39656 456 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TPMTP51580 245 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 MAPK12P53778 367 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TMBIM6P55061 237 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 BST2Q10589 180 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 NFATC3Q12968 1075 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 SLC29A2Q14542 456 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 ZACNQ401N2 412 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 IQCCQ4KMZ1 466 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 ZMAT1Q5H9K5 638 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GALNT18Q6P9A2 607 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 TRAF7Q6Q0C0 670 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 RNF111Q6ZNA4 994 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GADL1Q6ZQY3 521 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 P3H2Q8IVL5 708 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 COLGALT2Q8IYK4 626 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 HS6ST3Q8IZP7 471 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 FANCBQ8NB91 859 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 ZNF540Q8NDQ6 660 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 FBXO30Q8TB52 745 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 ASZ1Q8WWH4 475 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 AKAP1Q92667 903 aaKnown RBP eCLIP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 FBXW5Q969U6 566 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GCNAQ96QF7 691 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 NTPCRQ9BSD7 190 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 GCOM2Q9BZD3 368 aaPredicted RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 DNAJC17Q9NVM6 304 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 MAT2BQ9NZL9 334 aa9.03□□□□□ -0.96
COMMD3-215ENST00000602574 CNOT6Q9ULM6 557 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 MTO1Q9Y2Z2 717 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 MRPS23Q9Y3D9 190 aaKnown RBP9.03□□□□□ -0.96
COMMD3-215ENST00000602574 A0A0G2JPF8 293 aa9.02□□□□□ -0.96
COMMD3-215ENST00000602574 HNRNPCL3B7ZW38 293 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms